RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SNU13P55769 128 aaKnown RBP11.53□□□□□ -0.56
BEST1-208ENST00000534553 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
BEST1-208ENST00000534553 GNG3P63215 75 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 SURF2Q15527 256 aaPredicted RBP11.53□□□□□ -0.56
BEST1-208ENST00000534553 GRK1Q15835 563 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 NKPD1Q17RQ9 610 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 FAM180AQ6UWF9 173 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 RFPL4BQ6ZWI9 263 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 ASCC1Q8N9N2 400 aaKnown RBP11.53□□□□□ -0.56
BEST1-208ENST00000534553 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 OR5AP2Q8NGF4 316 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
BEST1-208ENST00000534553 TNRC6AQ8NDV7 1962 aaKnown RBP11.52□□□□□ -0.56
BEST1-208ENST00000534553 RRP8O43159 456 aaKnown RBP11.52□□□□□ -0.57
BEST1-208ENST00000534553 SMPD2O60906 423 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 TNFSF13O75888 250 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 PLATP00750 562 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 IL2RAP01589 272 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 PMP2P02689 132 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 CSN2P05814 226 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 RAC2P15153 192 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 C4BPBP20851 252 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 HAAOP46952 286 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 PRSS12P56730 875 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 TSPAN5P62079 268 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 HLXQ14774 488 aaPredicted RBP11.52□□□□□ -0.57
BEST1-208ENST00000534553 TAF9Q16594 264 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 MPV17LQ2QL34 196 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 CHRFAM7AQ494W8 412 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 VWA1Q6PCB0 445 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 SLC25A26Q70HW3 274 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 C6orf201Q7Z4U5 140 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 MUC20Q8N307 709 aaPredicted RBP11.52□□□□□ -0.57
BEST1-208ENST00000534553 OR2T35Q8NGX2 323 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 OR5P3Q8WZ94 311 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 TMEM246Q9BRR3 403 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 SCNM1Q9BWG6 230 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 PKIBQ9C010 78 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 CELSR3Q9NYQ7 3312 aa11.52□□□□□ -0.57
BEST1-208ENST00000534553 CGAP01215 116 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 PDGFAP04085 211 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 FUT3P21217 361 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 IDH3GP51553 393 aaPredicted RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 FGF12P61328 243 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 PPP1CBP62140 327 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 C1orf185Q5T7R7 199 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 FBXL14Q8N1E6 418 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 C12orf45Q8N5I9 185 aaPredicted RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 ST6GALNAC5Q9BVH7 336 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 PPA2Q9H2U2 334 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ZNF701Q9NV72 531 aaPredicted RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ASPMQ8IZT6 3477 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ZNF732B4DXR9 585 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 TRAPPC2LH3BP13 241 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 GEMIN2O14893 280 aaKnown RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 SFTPBP07988 381 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 FPR2P25090 351 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 GPM6AP51674 278 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ARPC4P59998 168 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 IFITM2Q01629 132 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 IL24Q13007 206 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 DHRS2Q13268 280 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 SIGIRRQ6IA17 410 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 NCCRP1Q6ZVX7 275 aaPredicted RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 NLRC3Q7RTR2 1065 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 OVCH2Q7RTZ1 564 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 LYG2Q86SG7 212 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 TMEM185AQ8NFB2 350 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 OR10AD1Q8NGE0 317 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 MICU1Q9BPX6 476 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 RTL8AQ9BWD3 113 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 TMPRSS13Q9BYE2 586 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ZNF71Q9NQZ8 489 aaPredicted RBP11.51□□□□□ -0.57
BEST1-208ENST00000534553 MGAT4AQ9UM21 535 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 HSPB11Q9Y547 144 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 RTTNQ86VV8 2226 aa11.51□□□□□ -0.57
BEST1-208ENST00000534553 ZFHX4Q86UP3 3567 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 K7ENP7 123 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 HLA-AP01891 365 aaKnown RBP11.5□□□□□ -0.57
BEST1-208ENST00000534553 UCNP55089 124 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 UCP2P55851 309 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
BEST1-208ENST00000534553 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
BEST1-208ENST00000534553 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 C11orf88Q6PI97 169 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 C3P1Q6ZMU1 363 aa11.5□□□□□ -0.57
BEST1-208ENST00000534553 PEG10Q86TG7 708 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms