RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	HIST1H1D	P16402	221 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	S100A4	P26447	101 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MESP2	Q0VG99	397 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	P2RY6	Q15077	328 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR5B3	Q8NH48	314 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CHRDL1	Q9BU40	450 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CA10	Q9NS85	328 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CABIN1	Q9Y6J0	2220 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CHEK1	O14757	476 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SMIM17	P0DL12	118 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CTRB1	P17538	263 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OPRK1	P41145	380 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR3A1	P47881	315 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	HMGA2	P52926	109 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CTRB2	Q6GPI1	263 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR13D1	Q8NGV5	346 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	RASL11B	Q9BPW5	248 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TINAG	Q9UJW2	476 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	COL24A1	Q17RW2	1714 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CALCR	P30988	508 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SLC25A35	Q3KQZ1	300 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZNF528	Q3MIS6	628 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAM122C	Q6P4D5	195 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	C20orf196	Q8IYI0	205 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ARHGAP5-AS1	Q96IT6	56 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	COL4A5	P29400	1685 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAM157A	C9JC47	383 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	HRK	O00198	91 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZFPL1	O95159	310 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TAGLN2	P37802	199 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	AKR1C3	P42330	323 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PCBP3	P57721	371 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TMEM128	Q5BJH2	165 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAM27D1	Q5T7N8	215 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FHL5	Q5TD97	284 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SPNS3	Q6ZMD2	512 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SKA3	Q8IX90	412 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZNF721	Q8TF20	911 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR2H1	Q9GZK4	316 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CASP8AP2	Q9UKL3	1982 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SEMG1	P04279	462 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	HIKESHI	Q53FT3	197 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	C1QL3	Q5VWW1	255 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAAP20	Q6NZ36	180 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	C20orf24	Q9BUV8	137 aa		13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.92	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ATG2B	Q96BY7	2078 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MEX3A	A1L020	520 aa	Known RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	DYNC2LI1	Q8TCX1	351 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	DIRC2	Q96SL1	478 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TMEM208	Q9BTX3	173 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	AUNIP	Q9H7T9	357 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CES1P1	Q9UKY3	287 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ICAM5	Q9UMF0	924 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MRPS18B	Q9Y676	258 aa	Known RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	IGHV1-45	A0A0A0MS14	117 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	KRBOX1	C9JBD0	128 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	LANCL1	O43813	399 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MPZL1	O95297	269 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FGF7	P21781	194 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PEBP1	P30086	187 aa	Known RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR2B8P	P59922	312 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MRPS11	P82912	194 aa	Known RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR4F5	Q8NH21	305 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SMIM4	Q8WVI0	70 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	C10orf35	Q96D05	121 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR4F4	Q96R69	305 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAAP24	Q9BTP7	215 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ADGRL4	Q9HBW9	690 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	IGHV3-43	A0A0B4J1X8	118 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SNRPGP15	A8MWD9	76 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	IGHV3-43D	P0DP04	118 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	RRAS	P10301	218 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	DCTD	P32321	178 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	LPAR6	P43657	344 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	NDUFA6	P56556	154 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	C19orf48	Q6RUI8	117 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	THSD4	Q6ZMP0	1018 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	UCN2	Q96RP3	112 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TNS1	Q9HBL0	1735 aa	Known RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SFTPA2	Q8IWL1	248 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR4F17	Q8NGA8	305 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR4C16	Q8NGL9	310 aa		13.91	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MAMSTR	Q6ZN01	415 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TMEM251	Q8N6I4	163 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	MARC2	Q969Z3	335 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	LRFN3	Q9BTN0	628 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PLPP2	O43688	288 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ASCL1	P50553	236 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAM214B	Q7L5A3	538 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FAM181A	Q8N9Y4	354 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PIGM	Q9H3S5	423 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZNF385D	Q9H6B1	395 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	TMEM38B	Q9NVV0	291 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PRR33	A8MZF0	331 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR8B12	Q8NGG6	310 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms