RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 OR52B2Q96RD2 323 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CDRT15Q96T59 188 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 P2RX4Q99571 388 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 SEPHS2Q99611 448 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NABP2Q9BQ15 211 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 SIKE1Q9BRV8 207 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 WDR13Q9H1Z4 485 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 WDR55Q9H6Y2 383 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 RAB18Q9NP72 206 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TAS2R1Q9NYW7 299 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 PRPF19Q9UMS4 504 aaKnown RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TCF19Q9Y242 345 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF256Q9Y2P7 627 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NDUFAF1Q9Y375 327 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 LRRC42Q9Y546 428 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 HILPDAQ9Y5L2 63 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 COMMD3-BMI1R4GMX3 469 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TRAV38-1A0A0B4J264 116 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A0G2JPF8 293 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SMIM31A0A1B0GVY4 71 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1B0GWJ7 208 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1W2PQ09 198 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 hCG_1807616A0A1W2PRN6 198 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 NPIPB13A6NJU9 1138 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TRPC5OSA6NMA1 111 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CPSF4LA6NMK7 179 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 NPIPB5A8MRT5 1133 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PRSS47A8MTI9 375 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 IQCF6A8MYZ5 107 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HNRNPCL2B2RXH8 293 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SEC14L6B5MCN3 397 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HNRNPCL3B7ZW38 293 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TEX22C9J3V5 150 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 NPIPB4C9JG80 1138 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 H0YAE9 185 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 H3BSA7 217 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 H3BSH0 61 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 BOLA2-SMG1P6H3BVE0 249 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MRASO14807 208 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ANGPT2O15123 496 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RER1O15258 196 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MAGEB3O15480 346 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SGCEO43556 437 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 NDUFB3O43676 98 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A17O43808 307 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 DOK2O60496 412 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 FMO6PO60774 539 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TIPRLO75663 272 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CLIC3O95833 236 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MT-ND1P03886 318 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST1H2ABP04908 130 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SMIM18P0DKX4 95 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HNRNPCL4P0DMR1 293 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SPNP16150 400 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CCL3L1P16619 93 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TNFRSF1BP20333 461 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 S100A3P33764 101 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CD200P41217 278 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RGS6P49758 472 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 VEGFCP49767 419 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF133P52736 654 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PSME3P61289 254 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL23AP62750 156 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CSNK2BP67870 215 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL18Q07020 188 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CD47Q08722 323 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ACSM1Q08AH1 577 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 LRRC74AQ0VAA2 488 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ECH1Q13011 328 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 GK3PQ14409 553 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 GK2Q14410 553 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MAPRE2Q15555 327 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OR8G1Q15617 311 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 AANATQ16613 207 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PCK2Q16822 640 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC153Q494R4 210 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ABCA11PQ4W5N1 156 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ANXA8L1Q5VT79 327 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM268Q5VZI3 342 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TEX36Q5VZQ5 186 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM53AQ6NSI3 398 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TTC33Q6PID6 262 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CORO6Q6QEF8 472 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 GSG1LQ6UXU4 331 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 UNQ6126/PRO20091Q6UXV3 157 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 FBXW12Q6X9E4 464 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST3H2AQ7L7L0 130 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RRM2BQ7LG56 351 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PATL1Q86TB9 770 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF554Q86TJ5 538 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OFCC1Q8IZS5 231 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM185AQ8N0U4 392 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 IQCF1Q8N6M8 205 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SMYD1Q8NB12 490 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 NPEPL1Q8NDH3 523 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TSPAN14Q8NG11 270 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OR4M1Q8NGD0 313 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms