RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PQLC1Q8N2U9 271 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 CD177Q8N6Q3 437 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 SGMS2Q8NHU3 365 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 CHST5Q9GZS9 411 aa14.15□□□□□ -0.14
PHRF1-204ENST00000532550 METTL8Q9H825 291 aaKnown RBP14.15□□□□□ -0.14
PHRF1-204ENST00000532550 ELL3Q9HB65 397 aaPredicted RBP14.15□□□□□ -0.14
PHRF1-204ENST00000532550 LOC100130705A0A1B0GUX0 176 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PPH5 198 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 POM121CA8CG34 1229 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 RNASEK-C17orf49H0YIS7 233 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 J3QLW9 94 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 ZNF19P17023 458 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 PRB3Q04118 309 aaPredicted RBP14.14□□□□□ -0.15
PHRF1-204ENST00000532550 CNN3Q15417 329 aaKnown RBP14.14□□□□□ -0.15
PHRF1-204ENST00000532550 NCR3LG1Q68D85 454 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 SHISA2Q6UWI4 295 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 ENTHD1Q8IYW4 607 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 RHOXF1Q8NHV9 184 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 PP6455Q8WZ26 134 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 TAF15Q92804 592 aaKnown RBP eCLIP14.14□□□□□ -0.15
PHRF1-204ENST00000532550 LGALS12Q96DT0 336 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 CHIAQ9BZP6 476 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 DPAGT1Q9H3H5 408 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 UNKLQ9H9P5 680 aaKnown RBP14.14□□□□□ -0.15
PHRF1-204ENST00000532550 HES4Q9HCC6 221 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 FRRS1LQ9P0K9 344 aa14.14□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PRD5 423 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PRF3 423 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PRM7 423 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 NPFFO15130 113 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 INMTO95050 263 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 KNG1P01042 644 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 FBP1P09467 338 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 GABRB1P18505 474 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 OMGP23515 440 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 IER3P46695 156 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 CEBPDP49716 269 aaPredicted RBP14.13□□□□□ -0.15
PHRF1-204ENST00000532550 CCR9P51686 369 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 UBE2E1P51965 193 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 ATP1B3P54709 279 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 ERVK11-1P61568 191 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 ACTA2P62736 377 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 RPL31P62899 125 aaKnown RBP14.13□□□□□ -0.15
PHRF1-204ENST00000532550 ACTG2P63267 376 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 FDX2Q6P4F2 183 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 LHFPL3Q86UP9 236 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 OR5D13Q8NGL4 314 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 TNFRSF14Q92956 283 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 STMN2Q93045 179 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
PHRF1-204ENST00000532550 FGGYQ96C11 551 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 CEP19Q96LK0 163 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 FAM118AQ9NWS6 357 aa14.13□□□□□ -0.15
PHRF1-204ENST00000532550 SF3B6Q9Y3B4 125 aaKnown RBP14.13□□□□□ -0.15
PHRF1-204ENST00000532550 IGKV1-27A0A075B6S5 117 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 FADS2O95864 444 aaKnown RBP14.12□□□□□ -0.15
PHRF1-204ENST00000532550 IGHV4-59P01825 116 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 ISG15P05161 165 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 OCM2P0CE71 109 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
PHRF1-204ENST00000532550 DBTP11182 482 aaKnown RBP14.12□□□□□ -0.15
PHRF1-204ENST00000532550 ZNF20P17024 532 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 RBP2P50120 134 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 DLX1P56177 255 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 NANOS3P60323 173 aaKnown RBP14.12□□□□□ -0.15
PHRF1-204ENST00000532550 ZNF91Q05481 1191 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 KLRD1Q13241 179 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 GALEQ14376 348 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 LDLRAD3Q86YD5 345 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 EGFL6Q8IUX8 553 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 ZNF555Q8NEP9 628 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 DYRK2Q92630 601 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 C4orf36Q96KX1 117 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 FAM234AQ9H0X4 552 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 AMBNQ9NP70 447 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 C19orf12Q9NSK7 152 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 MTCH1Q9NZJ7 389 aa14.12□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1B0GUS0 222 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 hCG_1809904A0A1W2PP81 198 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PPE2 198 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PR64 198 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 A0A1W2PRV1 198 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MEIOCA2RUB1 952 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 CYB5AP00167 134 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 PAHP00439 452 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 TK1P04183 234 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 CHRM2P08172 466 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MDKP21741 143 aaPredicted RBP14.11□□□□□ -0.15
PHRF1-204ENST00000532550 PRKACBP22694 351 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MTCP1P56278 107 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 TMEM200BQ69YZ2 307 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 SLC25A26Q70HW3 274 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 UTS2BQ765I0 119 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MKXQ8IYA7 352 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 ZNF676Q8N7Q3 588 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 DNAAF1Q8NEP3 725 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 OR4M1Q8NGD0 313 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 OR4F5Q8NH21 305 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms