RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TRAPPC4Q9Y296 219 aa4.34□□□□□ -1.72
ECHDC1-222ENST00000531967 MYRFQ9Y2G1 1151 aa4.34□□□□□ -1.72
ECHDC1-222ENST00000531967 MRPS18CQ9Y3D5 142 aaKnown RBP4.34□□□□□ -1.72
ECHDC1-222ENST00000531967 HSPB11Q9Y547 144 aa4.34□□□□□ -1.72
ECHDC1-222ENST00000531967 RGPD2P0DJD1 1756 aa4.34□□□□□ -1.72
ECHDC1-222ENST00000531967 PALLDQ8WX93 1383 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MFNGO00587 321 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 TYROBPO43914 113 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SPAG7O75391 227 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 CLDN1O95832 211 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 C1GALT1C1LP0DN25 315 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SLC6A1P30531 599 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 RORCP51449 518 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 CDC42P60953 191 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 INSM1Q01101 510 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 CLINT1Q14677 625 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 LPCAT3Q6P1A2 487 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 FAM231DQ6ZW35 169 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF843Q8N446 348 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 OR4F15Q8NGB8 312 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 OR1P1Q8NH06 330 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF564Q8TBZ8 553 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 DDIT4LQ96D03 193 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 BTF3L4Q96K17 158 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ALKBH3Q96Q83 286 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 GGACTQ9BVM4 153 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 QTRT1Q9BXR0 403 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SLC35A3Q9Y2D2 325 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ADAMTSL3P82987 1691 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 TIAM2Q8IVF5 1701 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MTCL1Q9Y4B5 1905 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 A0A087WUJ7 227 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 IGLV9-49A0A0B4J1Y8 123 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 NCBP2LA6PVI3 153 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MBTPS2O43462 519 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 PAK4O96013 591 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SEMG1P04279 462 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 HPNP05981 417 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MUC1P15941 1255 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MAKP20794 623 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 USF1P22415 310 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 CXCR1P25024 350 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SERPINB10P48595 397 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 PNOCQ13519 176 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 LAPTM4AQ15012 233 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF626Q68DY1 528 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 C8orf82Q6P1X6 216 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 RASSF6Q6ZTQ3 369 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 OR52E4Q8NGH9 312 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 MAPK15Q8TD08 544 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 FGF11Q92914 225 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 KCTD14Q9BQ13 255 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ARV1Q9H2C2 271 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SH2D2AQ9NP31 389 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 SLC7A10Q9NS82 523 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF224Q9NZL3 707 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 COPZ2Q9P299 210 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 THAP10Q9P2Z0 257 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 BAIAP2Q9UQB8 552 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 HSPE1-MOB4S4R3N1 261 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 CCDC88AQ3V6T2 1871 aa4.33□□□□□ -1.72
ECHDC1-222ENST00000531967 A0A0D9SFI3 127 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 CA11O75493 328 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 PROZP22891 400 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 ERP29P30040 261 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 GPR183P32249 361 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 CA5AP35218 305 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 GPM6AP51674 278 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 RAB2AP61019 212 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 TFDP3Q5H9I0 405 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 HECTD2Q5U5R9 776 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 APOOLQ6UXV4 268 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 SLC34A3Q8N130 599 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 LGI4Q8N135 537 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 RBMXL3Q8N7X1 1067 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 SDR42E1Q8WUS8 393 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 ASB13Q8WXK3 278 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 SLC45A3Q96JT2 553 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 ARHGDIGQ99819 225 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 NT5DC2Q9H857 520 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 NMNAT1Q9HAN9 279 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 DDIT4Q9NX09 232 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 LSM5Q9Y4Y9 91 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 SCN11AQ9UI33 1791 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 LRP6O75581 1613 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF609O15014 1411 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 KIF1AQ12756 1690 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 ANKRD36CQ5JPF3 1778 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 A0A1W2PPI3 338 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 SOX14O95416 240 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 MT-CO2P00403 227 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 HPRT1P00492 218 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 H2AFB1P0C5Y9 115 aa4.32□□□□□ -1.72
ECHDC1-222ENST00000531967 HLA-DOBP13765 273 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms