RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PPA2Q9H2U2 334 aa18.19■□□□□ 0.5
TRAPPC4-210ENST00000531290 HEXA-AS1Q9H8Q6 139 aa18.19■□□□□ 0.5
TRAPPC4-210ENST00000531290 C19orf12Q9NSK7 152 aa18.19■□□□□ 0.5
TRAPPC4-210ENST00000531290 IMPAD1Q9NX62 359 aa18.19■□□□□ 0.5
TRAPPC4-210ENST00000531290 V9GYS6 101 aa18.19■□□□□ 0.5
TRAPPC4-210ENST00000531290 A0A1B0GTI1 187 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 PQLC2LA1A4F0 135 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 A6NIN4 97 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 EI24O14681 340 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 NOS1APO75052 506 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 BAG2O95816 211 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 ALPLP05186 524 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 KRT8P05787 483 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 ATP6V1E1P36543 226 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 POLR2IP36954 125 aaKnown RBP18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 RFKQ969G6 155 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 SSX3Q99909 188 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 USE1Q9NZ43 259 aa18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 MRM2Q9UI43 246 aaKnown RBP18.18■□□□□ 0.5
TRAPPC4-210ENST00000531290 DHRS7CA6NNS2 312 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 RPP14O95059 124 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 PDLIM3Q53GG5 364 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 TMEM200BQ69YZ2 307 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 SLC35E4Q6ICL7 350 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 HCP5Q6MZN7 132 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 MKXQ8IYA7 352 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 CBR4Q8N4T8 237 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 YIPF7Q8N8F6 280 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 OR4M1Q8NGD0 313 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 OR2T27Q8NH04 317 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 NRIP2Q9BQI9 281 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 WARS2Q9UGM6 360 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 SLC7A11Q9UPY5 501 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 SLC22A13Q9Y226 551 aa18.17■□□□□ 0.5
TRAPPC4-210ENST00000531290 H3BUX3 64 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 CEBPDP49716 269 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 PQLC1Q8N2U9 271 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 C17orf50Q8WW18 174 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 TRUB1Q8WWH5 349 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 EME1Q96AY2 570 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 TBX5Q99593 518 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 PLEKHA1Q9HB21 404 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 OR14J1Q9UGF5 321 aa18.16■□□□□ 0.5
TRAPPC4-210ENST00000531290 GABRA5P31644 462 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 LGALS4P56470 323 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 ZIK1Q3SY52 487 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 ZBTB49Q6ZSB9 765 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 ANGPTL5Q86XS5 388 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 BATF2Q8N1L9 274 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 RORBQ92753 470 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 ADI1Q9BV57 179 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 MEGF9Q9H1U4 602 aa18.15■□□□□ 0.5
TRAPPC4-210ENST00000531290 FAM230AA0A1W2PPH8 454 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 SYT7O43581 403 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 TK1P04183 234 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 OR2T7P0C7T2 308 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 MPZP25189 248 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 HTR1FP30939 366 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 TMED1Q13445 227 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 LY6EQ16553 131 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 ODF4Q2M2E3 257 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 LRRC75BQ2VPJ9 315 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 Q6ZSR3 168 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 TRMT10AQ8TBZ6 339 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 PKIBQ9C010 78 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 FBLN5Q9UBX5 448 aa18.14■□□□□ 0.49
TRAPPC4-210ENST00000531290 A0A1W2PQL4 384 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 METTL15A6NJ78 407 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 SNTNA6NMZ2 147 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 CCL1P22362 96 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 COX7A1P24310 79 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 ERVFRD-1P60508 538 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 IL24Q13007 206 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 AANATQ16613 207 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 SSX6Q7RTT6 188 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 CALHM1Q8IU99 346 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 OR10H4Q8NGA5 316 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 HRASLS5Q96KN8 279 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 HES4Q9HCC6 221 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 RAB18Q9NP72 206 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 CMYA5Q8N3K9 4069 aa18.13■□□□□ 0.49
TRAPPC4-210ENST00000531290 SULT1C4O75897 302 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 SERPINA3P01011 423 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 CCL3L1P16619 93 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 CATSPERDQ86XM0 798 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 C11orf42Q8N5U0 333 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 CCDC54Q8NEL0 328 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 OR4C13Q8NGP0 309 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 AJUBAQ96IF1 538 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 GMPPBQ9Y5P6 360 aa18.12■□□□□ 0.49
TRAPPC4-210ENST00000531290 H3BSH0 61 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 GATBO75879 557 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 APOL3O95236 402 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 CHRM2P08172 466 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 PIPP12273 146 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 FUT6P51993 359 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 ERVK11-1P61568 191 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 COL10A1Q03692 680 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 C2orf68Q2NKX9 166 aa18.11■□□□□ 0.49
TRAPPC4-210ENST00000531290 MEDAGQ5VYS4 303 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms