RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LY6EQ16553 131 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 AANATQ16613 207 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 KDM4DQ6B0I6 523 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 GID4Q8IVV7 300 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 BATF2Q8N1L9 274 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 IL4I1Q96RQ9 567 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 SLC22A13Q9Y226 551 aa12.83□□□□□ -0.36
CPSF1-205ENST00000531042 hCG_1809904A0A1W2PP81 198 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 A0A1W2PPE2 198 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 A0A1W2PR64 198 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 A0A1W2PRV1 198 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 TK1P04183 234 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 CCL3L1P16619 93 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 CCL1P22362 96 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 KIR2DS4P43632 304 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 ERVFRD-1P60508 538 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 ZNF273Q14593 569 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 C2orf68Q2NKX9 166 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 ANGPTL5Q86XS5 388 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 PKIBQ9C010 78 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 GABARAPL1Q9H0R8 117 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 USE1Q9NZ43 259 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 OR14J1Q9UGF5 321 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.365e-7■□□□□ 10.1
CPSF1-205ENST00000531042 SIGLEC9Q9Y336 463 aa12.82□□□□□ -0.36
CPSF1-205ENST00000531042 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-205ENST00000531042 K7N7A8 449 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 RPP14O95059 124 aaKnown RBP12.81□□□□□ -0.36
CPSF1-205ENST00000531042 KRT8P05787 483 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 COX7A1P24310 79 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 BMXP51813 675 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 EFNB2P52799 333 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 IL24Q13007 206 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 ZDHHC13Q8IUH4 622 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 YIPF7Q8N8F6 280 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-205ENST00000531042 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
CPSF1-205ENST00000531042 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 TBX5Q99593 518 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
CPSF1-205ENST00000531042 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
CPSF1-205ENST00000531042 PRKDCP78527 4128 aaKnown RBP12.81□□□□□ -0.36
CPSF1-205ENST00000531042 FAM230AA0A1W2PPH8 454 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-205ENST00000531042 C17orf98A8MV24 154 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 CSF1P09603 554 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 FASP25445 335 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 DLX6P56179 175 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 LGALS4P56470 323 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 COL10A1Q03692 680 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 BNIP1Q12981 228 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 HERPUD1Q15011 391 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 UBE2V2Q15819 145 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 ODF4Q2M2E3 257 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 AMIGO2Q86SJ2 522 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 OR4C13Q8NGP0 309 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 CIB1Q99828 191 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-205ENST00000531042 SLC7A11Q9UPY5 501 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 AP4S1Q9Y587 144 aa12.8□□□□□ -0.36
CPSF1-205ENST00000531042 MEGF11A6BM72 1044 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 METTL15A6NJ78 407 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 FAM90A8PA6NJQ4 464 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 F8VVB4 439 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 F8VWA3 439 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 H3BSH0 61 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 SYT7O43581 403 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 CHRM2P08172 466 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
CPSF1-205ENST00000531042 HTR1FP30939 366 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 POLR2IP36954 125 aaKnown RBP12.79□□□□□ -0.36
CPSF1-205ENST00000531042 ZNF782Q6ZMW2 699 aaPredicted RBP12.79□□□□□ -0.36
CPSF1-205ENST00000531042 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 Q6ZTK2 550 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 LHFPL4Q7Z7J7 247 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
CPSF1-205ENST00000531042 OR2T6Q8NHC8 308 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 MTCH1Q9NZJ7 389 aa12.79□□□□□ -0.36
CPSF1-205ENST00000531042 DSCAML1Q8TD84 2053 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 CHST1O43916 411 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 ZNF737O75373 536 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 SULT1C4O75897 302 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 APOL3O95236 402 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 FUT6P51993 359 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 C1QL4Q86Z23 238 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 DYNAPQ8N1N2 210 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 CFHR4Q92496 578 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms