RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SLAMF9Q96A28 289 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 CEP19Q96LK0 163 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 GFI1Q99684 422 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 NKX3-1Q99801 234 aaPredicted RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 WDR13Q9H1Z4 485 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 RNF167Q9H6Y7 350 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 CNTD2Q9H8S5 307 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 RHOFQ9HBH0 211 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 HES4Q9HCC6 221 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 AK6Q9Y3D8 172 aaKnown RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 TRAV38-1A0A0B4J264 116 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 IGKV1-12A0A0C4DH73 117 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 OOEPA6NGQ2 149 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 TRAPPC2LH3BP13 241 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 LGALS8O00214 317 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 WNT9BO14905 357 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 ZNF205O95201 554 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 IGKV1D-12P01611 117 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 MUC1P15941 1255 aaPredicted RBP14.19□□□□□ -0.14
SF3B2-211ENST00000531041 CD80P33681 288 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 OR3A4PP47883 348 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 AVPI1Q5T686 147 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 GPR107Q5VW38 600 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 SFRP4Q6FHJ7 346 aaPredicted RBP14.19□□□□□ -0.14
SF3B2-211ENST00000531041 SLC16A12Q6ZSM3 486 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 C1QL2Q7Z5L3 287 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 MUC20Q8N307 709 aaPredicted RBP14.19□□□□□ -0.14
SF3B2-211ENST00000531041 ZNF488Q96MN9 340 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 TMEM165Q9HC07 324 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 SMURF1Q9HCE7 757 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 V9GY05 133 aa14.19□□□□□ -0.14
SF3B2-211ENST00000531041 OTOGQ6ZRI0 2925 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 C3orf80F5H4A9 247 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 F8VVB4 439 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 F8VWA3 439 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 KDM4BO94953 1096 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 NXPH2O95156 264 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 GABARAPO95166 117 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 RAB3BP20337 219 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 NPBWR2P48146 333 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 KCNJ8Q15842 424 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 MICBQ29980 383 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 SMIM21Q3B7S5 101 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 ZNF404Q494X3 552 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 TMEM155Q4W5P6 130 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 ACP7Q6ZNF0 438 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 FAM90A1Q86YD7 464 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 C19orf18Q8NEA5 215 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 OR4D6Q8NGJ1 314 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 C12orf43Q96C57 262 aaKnown RBP14.18□□□□□ -0.14
SF3B2-211ENST00000531041 FAM192AQ9GZU8 254 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 IL36GQ9NZH8 169 aa14.18□□□□□ -0.14
SF3B2-211ENST00000531041 A0A096LNT2 108 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 ISPDA4D126 451 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 BCL3P20749 454 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 SDC2P34741 201 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 GMFBP60983 142 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 LSM3P62310 102 aaKnown RBP14.17□□□□□ -0.14
SF3B2-211ENST00000531041 FAM166AQ6J272 317 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 DEFB108BQ8NET1 73 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 Q8NFD4 153 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 SEH1LQ96EE3 360 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 S100A13Q99584 98 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 TMEM246Q9BRR3 403 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 REG4Q9BYZ8 158 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 NAA50Q9GZZ1 169 aaKnown RBP14.17□□□□□ -0.14
SF3B2-211ENST00000531041 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
SF3B2-211ENST00000531041 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
SF3B2-211ENST00000531041 IGHV3OR15-7A0A075B7D8 119 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 SLC17A2O00624 439 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 SLC22A1O15245 554 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 NDUFA2O43678 99 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 CDRT1O95170 752 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 SFTPBP07988 381 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 CFPP27918 469 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 HTR2CP28335 458 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 OR10A3P58181 314 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 RSU1Q15404 277 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 CTF1Q16619 201 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 ELP2Q6IA86 826 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 DCDC5Q6ZRR9 648 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 NR2C2APQ86WQ0 139 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 FAM58AQ8N1B3 248 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 BATF2Q8N1L9 274 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 SPICQ8N5J4 248 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 OR6M1Q8NGM8 313 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 TBC1D15Q8TC07 691 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 C1orf147Q96MC9 270 aaPredicted RBP14.16□□□□□ -0.14
SF3B2-211ENST00000531041 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 PLGRKTQ9HBL7 147 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 RBFOX1Q9NWB1 397 aaKnown RBP14.16□□□□□ -0.14
SF3B2-211ENST00000531041 NLKQ9UBE8 527 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 GHRLQ9UBU3 117 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 ING4Q9UNL4 249 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 AKAP9Q99996 3911 aa14.16□□□□□ -0.14
SF3B2-211ENST00000531041 IGHV4-61A0A0C4DH41 118 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 OR2AT4A6NND4 320 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 TNFRSF13BO14836 293 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 ZNF780AO75290 641 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms