RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SERINC1Q9NRX5 453 aa12.46□□□□□ -0.42
USP48-213ENST00000529637 TIAF1O95411 115 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 GLI4P10075 376 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 MAS1LP35410 378 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 PI4KAP42356 2102 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OR3A2P47893 321 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 MYBPHQ13203 477 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 KDF1Q8NAX2 398 aaPredicted RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 ABHD14AQ9BUJ0 271 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SUCNR1Q9BXA5 334 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 VPS13AQ96RL7 3174 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SLC31A2O15432 143 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 BTF3P20290 206 aaKnown RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 DDTP30046 118 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 ACY1Q03154 408 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 PRAMEF20Q5VT98 475 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 UEVLDQ8IX04 471 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 PLPP5Q8NEB5 264 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OR10G3Q8NGC4 313 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 PHF7Q9BWX1 381 aaPredicted RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 PBOV1Q9GZY1 135 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SRPK3Q9UPE1 567 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 CACNA1EQ15878 2313 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 MYO7BQ6PIF6 2116 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SCRG1O75711 98 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OR2J2O76002 312 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 DIRAS3O95661 229 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SNU13P55769 128 aaKnown RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
USP48-213ENST00000529637 SLC35A1P78382 337 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 SOHLH1Q5JUK2 328 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OPN5Q6U736 354 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OR5D18Q8NGL1 313 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
USP48-213ENST00000529637 A0A087X0M5 115 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 A0A1B0GX30 115 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 F10P00742 488 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 TRGC2P03986 189 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 HCKP08631 526 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 ELOBQ15370 118 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 SP6Q3SY56 376 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 GGNBP1Q5YKI7 109 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 PLXDC2Q6UX71 529 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 NPRL2Q8WTW4 380 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 H0YL77 283 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 CDC14BO60729 498 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 FABP4P15090 132 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 NHLH2Q02577 135 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 REC114Q7Z4M0 266 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 RNF133Q8WVZ7 376 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 RAB39BQ96DA2 213 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 FAM206AQ9NX38 181 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 LUZP4Q9P127 313 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
USP48-213ENST00000529637 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
USP48-213ENST00000529637 BTBD17A6NE02 478 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 LIPT2A6NK58 231 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 IGHMP01871 453 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TAS2R60P59551 318 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 MFAP5Q13361 173 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TMEM182Q6ZP80 229 aaPredicted RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 HIST3H2BBQ8N257 126 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 FAM213BQ8TBF2 198 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 GALNT14Q96FL9 552 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 B3GALT5Q9Y2C3 310 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 MEMO1Q9Y316 297 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 LMO1P25800 156 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 RHBDD2Q6NTF9 364 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 COL4A2P08572 1712 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 H3BQ15 152 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TERTO14746 1132 aaKnown RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 RBMXP38159 391 aaKnown RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 MMP16P51512 607 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TMEM176BQ3YBM2 270 aaPredicted RBP12.43□□□□□ -0.42
USP48-213ENST00000529637 C4orf17Q53FE4 359 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 ZNF283Q8N7M2 679 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 CA5BP1Q8WTZ4 195 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 HPSE2Q8WWQ2 592 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 ARV1Q9H2C2 271 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms