RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 OMGP23515 440 aa2.55□□□□□ -2
CD44-229ENST00000528672 RPS12P25398 132 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 S100GP29377 79 aa2.55□□□□□ -2
CD44-229ENST00000528672 VHLP40337 213 aa2.55□□□□□ -2
CD44-229ENST00000528672 PTGDSP41222 190 aa2.55□□□□□ -2
CD44-229ENST00000528672 KIR2DS2P43631 304 aa2.55□□□□□ -2
CD44-229ENST00000528672 DNASE1L1P49184 302 aa2.55□□□□□ -2
CD44-229ENST00000528672 GPM6AP51674 278 aa2.55□□□□□ -2
CD44-229ENST00000528672 BIDP55957 195 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR10A3P58181 314 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR2B8PP59922 312 aa2.55□□□□□ -2
CD44-229ENST00000528672 CKS1BP61024 79 aa2.55□□□□□ -2
CD44-229ENST00000528672 UBE2MP61081 183 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 MAXP61244 160 aa2.55□□□□□ -2
CD44-229ENST00000528672 RHOAP61586 193 aa2.55□□□□□ -2
CD44-229ENST00000528672 STXBP1P61764 594 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 RRAS2P62070 204 aaPredicted RBP2.55□□□□□ -2
CD44-229ENST00000528672 CD47Q08722 323 aa2.55□□□□□ -2
CD44-229ENST00000528672 TCP10Q12799 353 aa2.55□□□□□ -2
CD44-229ENST00000528672 C16orf72Q14CZ0 275 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR1Q1Q15612 314 aa2.55□□□□□ -2
CD44-229ENST00000528672 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
CD44-229ENST00000528672 SPIN4Q56A73 249 aa2.55□□□□□ -2
CD44-229ENST00000528672 TCTEX1D4Q5JR98 221 aa2.55□□□□□ -2
CD44-229ENST00000528672 ACTL10Q5JWF8 245 aa2.55□□□□□ -2
CD44-229ENST00000528672 AK9Q5TCS8 1911 aa2.55□□□□□ -2
CD44-229ENST00000528672 ZC2HC1BQ5TFG8 222 aa2.55□□□□□ -2
CD44-229ENST00000528672 SAMD13Q5VXD3 122 aa2.55□□□□□ -2
CD44-229ENST00000528672 MROH7Q68CQ1 1323 aa2.55□□□□□ -2
CD44-229ENST00000528672 SMARCD3Q6STE5 483 aa2.55□□□□□ -2
CD44-229ENST00000528672 RNF165Q6ZSG1 346 aa2.55□□□□□ -2
CD44-229ENST00000528672 SSX6Q7RTT6 188 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
CD44-229ENST00000528672 NIT1Q86X76 327 aa2.55□□□□□ -2
CD44-229ENST00000528672 SLC30A8Q8IWU4 369 aa2.55□□□□□ -2
CD44-229ENST00000528672 SKA3Q8IX90 412 aa2.55□□□□□ -2
CD44-229ENST00000528672 FTMTQ8N4E7 242 aa2.55□□□□□ -2
CD44-229ENST00000528672 ARIH2OSQ8N7S6 290 aa2.55□□□□□ -2
CD44-229ENST00000528672 CARMIL3Q8ND23 1372 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR52I1Q8NGK6 324 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR4P4Q8NGL7 312 aa2.55□□□□□ -2
CD44-229ENST00000528672 SYNPRQ8TBG9 265 aa2.55□□□□□ -2
CD44-229ENST00000528672 TNFAIP8L1Q8WVP5 186 aa2.55□□□□□ -2
CD44-229ENST00000528672 OR5P2Q8WZ92 322 aa2.55□□□□□ -2
CD44-229ENST00000528672 FGF11Q92914 225 aa2.55□□□□□ -2
CD44-229ENST00000528672 RAB8BQ92930 207 aa2.55□□□□□ -2
CD44-229ENST00000528672 PAGE5Q96GU1 130 aa2.55□□□□□ -2
CD44-229ENST00000528672 PYURFQ96I23 114 aa2.55□□□□□ -2
CD44-229ENST00000528672 CAPZA3Q96KX2 299 aa2.55□□□□□ -2
CD44-229ENST00000528672 NUDT9Q9BW91 350 aa2.55□□□□□ -2
CD44-229ENST00000528672 SRXN1Q9BYN0 137 aa2.55□□□□□ -2
CD44-229ENST00000528672 TBL1XR1Q9BZK7 514 aa2.55□□□□□ -2
CD44-229ENST00000528672 NAA50Q9GZZ1 169 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 ARL6Q9H0F7 186 aa2.55□□□□□ -2
CD44-229ENST00000528672 LRTM1Q9HBL6 345 aa2.55□□□□□ -2
CD44-229ENST00000528672 ZNF107Q9UII5 783 aaPredicted RBP2.55□□□□□ -2
CD44-229ENST00000528672 GNG8Q9UK08 70 aa2.55□□□□□ -2
CD44-229ENST00000528672 JPT1Q9UK76 154 aa2.55□□□□□ -2
CD44-229ENST00000528672 ING4Q9UNL4 249 aa2.55□□□□□ -2
CD44-229ENST00000528672 SLC17A4Q9Y2C5 497 aa2.55□□□□□ -2
CD44-229ENST00000528672 UTP11Q9Y3A2 253 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 SETBP1Q9Y6X0 1596 aa2.54□□□□□ -2
CD44-229ENST00000528672 CLIP1P30622 1438 aa2.54□□□□□ -2
CD44-229ENST00000528672 FGD6Q6ZV73 1430 aa2.54□□□□□ -2
CD44-229ENST00000528672 MED23Q9ULK4 1368 aa2.54□□□□□ -2
CD44-229ENST00000528672 ASTN1O14525 1302 aa2.54□□□□□ -2
CD44-229ENST00000528672 A0A0A6YYD5 115 aa2.54□□□□□ -2
CD44-229ENST00000528672 TGIF2-C20orf24A0A0A6YYL0 155 aa2.54□□□□□ -2
CD44-229ENST00000528672 A0A0B4J2E0 115 aa2.54□□□□□ -2
CD44-229ENST00000528672 KIR2DS1A0A191URI9 304 aa2.54□□□□□ -2
CD44-229ENST00000528672 A0A1B0GX12 115 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR5H14A6NHG9 310 aa2.54□□□□□ -2
CD44-229ENST00000528672 EFCAB9A8MZ26 197 aa2.54□□□□□ -2
CD44-229ENST00000528672 SEC14L6B5MCN3 397 aa2.54□□□□□ -2
CD44-229ENST00000528672 TRAPPC2LH3BP13 241 aa2.54□□□□□ -2
CD44-229ENST00000528672 DNASE2O00115 360 aaPredicted RBP2.54□□□□□ -2
CD44-229ENST00000528672 MBTPS2O43462 519 aa2.54□□□□□ -2
CD44-229ENST00000528672 PDE6DO43924 150 aa2.54□□□□□ -2
CD44-229ENST00000528672 ZNF253O75346 499 aa2.54□□□□□ -2
CD44-229ENST00000528672 CRLF1O75462 422 aa2.54□□□□□ -2
CD44-229ENST00000528672 TNFSF15O95150 251 aa2.54□□□□□ -2
CD44-229ENST00000528672 C1orf105O95561 183 aa2.54□□□□□ -2
CD44-229ENST00000528672 PTTG1O95997 202 aa2.54□□□□□ -2
CD44-229ENST00000528672 HAND1O96004 215 aa2.54□□□□□ -2
CD44-229ENST00000528672 CGAP01215 116 aa2.54□□□□□ -2
CD44-229ENST00000528672 RLN2P04090 185 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR8U8P0C7N1 319 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR56A5P0C7T3 313 aa2.54□□□□□ -2
CD44-229ENST00000528672 ZNF883P0CG24 379 aa2.54□□□□□ -2
CD44-229ENST00000528672 DUX4L4P0CJ87 422 aa2.54□□□□□ -2
CD44-229ENST00000528672 RBMY1CP0DJD4 496 aa2.54□□□□□ -2
CD44-229ENST00000528672 ZNF250P15622 560 aa2.54□□□□□ -2
CD44-229ENST00000528672 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
CD44-229ENST00000528672 ALOX5APP20292 161 aa2.54□□□□□ -2
CD44-229ENST00000528672 F2RP25116 425 aa2.54□□□□□ -2
CD44-229ENST00000528672 IL2RGP31785 369 aa2.54□□□□□ -2
CD44-229ENST00000528672 GPR1P46091 355 aa2.54□□□□□ -2
CD44-229ENST00000528672 RORCP51449 518 aa2.54□□□□□ -2
CD44-229ENST00000528672 TDGF1P3P51864 188 aa2.54□□□□□ -2
CD44-229ENST00000528672 CRISP1P54107 249 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms