RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ID4P47928 161 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 RPS27AP62979 156 aaKnown RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 UBA52P62987 128 aaKnown RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 SHEQ5VZ18 495 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 HPNP05981 417 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 PPP3CBP16298 524 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 SLC25A53Q5H9E4 307 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 PRAMEF5Q5TYX0 476 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 PRAMEF6Q5VXH4 476 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 STARD10Q9Y365 291 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 A0A0A6YYJ9 748 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 J3QT63 122 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 SNRPNP63162 240 aaKnown RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 OR10AD1Q8NGE0 317 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 OR2J1Q9GZK6 312 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 ASF1BQ9NVP2 202 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 RALGAPA1Q6GYQ0 2036 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 DLL4Q9NR61 685 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 CDIPTO14735 213 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 FBXO24O75426 580 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 TPPPO94811 219 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 HLXQ14774 488 aaPredicted RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 BMPERQ8N8U9 685 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
USP47-207ENST00000527733 DDOQ99489 341 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
USP47-207ENST00000527733 CALCRP30988 508 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 TMEM128Q5BJH2 165 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 TMEM268Q5VZI3 342 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 LYG2Q86SG7 212 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 MRPS18CQ9Y3D5 142 aaKnown RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 RAMP1O60894 148 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 SERPINF1P36955 418 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 FNDC7Q5VTL7 733 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 BRICD5Q6PL45 260 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 FYTTD1Q96QD9 318 aaKnown RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 A0A0B4J2A0 478 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 NDUFB6O95139 128 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 NHLRC1Q6VVB1 395 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 TSNAXQ99598 290 aaKnown RBP13.17□□□□□ -0.3
USP47-207ENST00000527733 SHPKQ9UHJ6 478 aa13.17□□□□□ -0.3
USP47-207ENST00000527733 IGLV3-32A0A0A0MS00 114 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 RAB11AP62491 216 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 OR2B11Q5JQS5 317 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 OR8U1Q8NH10 309 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
USP47-207ENST00000527733 MS4A5Q9H3V2 200 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 S100A11P31949 105 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 CDH26Q8IXH8 852 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 SLC35G3Q8N808 338 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 MIXL1Q9H2W2 232 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 UNKLQ9H9P5 680 aaKnown RBP13.16□□□□□ -0.3
USP47-207ENST00000527733 GPR31O00270 319 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 SUCLG1P53597 346 aaKnown RBP13.16□□□□□ -0.3
USP47-207ENST00000527733 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 CRHP06850 196 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 SLC38A6Q8IZM9 456 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 SHISA5Q8N114 240 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 ZDHHC22Q8N966 263 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 YIPF5Q969M3 257 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
USP47-207ENST00000527733 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 TRBV5-5A0A0J9YX44 114 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 A0A1W2PPV4 95 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms