RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 OR2J1Q9GZK6 312 aa16.09■□□□□ 0.17
SMPD1-203ENST00000527275 BEX1Q9HBH7 125 aa16.09■□□□□ 0.17
SMPD1-203ENST00000527275 NGBQ9NPG2 151 aa16.09■□□□□ 0.17
SMPD1-203ENST00000527275 PTTG3PQ9NZH4 202 aa16.09■□□□□ 0.17
SMPD1-203ENST00000527275 FAM230AA0A1W2PPH8 454 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 NDUFB6O95139 128 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 RCVRNP35243 200 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 RAD52P43351 418 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 NKX2-5P52952 324 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-203ENST00000527275 BSPH1Q075Z2 132 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-203ENST00000527275 MED28Q9H204 178 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 OR51J1Q9H342 316 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 ABCA4P78363 2273 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 ICE1Q9Y2F5 2266 aa16.08■□□□□ 0.16
SMPD1-203ENST00000527275 ATP6V1G2-DDX39BF2Z307 99 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ARPC1BO15143 372 aaKnown RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 SOCS1O15524 211 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 CYB5AP00167 134 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 RPS27AP62979 156 aaKnown RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ZFP69Q49AA0 526 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 OR56B1Q8NGI3 324 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 OR10K1Q8NGX5 313 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 PIGCQ92535 297 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 RAB3CQ96E17 227 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 CPNE2Q96FN4 548 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ELL3Q9HB65 397 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ZNF107Q9UII5 783 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 LRRK2Q5S007 2527 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ZNF816-ZNF321PA0A0X1KG74 233 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ABCD4O14678 606 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 TMEM225BP0DP42 221 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 SRSF1Q07955 248 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 UNQ6126/PRO20091Q6UXV3 157 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 MRPL21Q7Z2W9 205 aaKnown RBP16.07■□□□□ 0.16
SMPD1-203ENST00000527275 TRAPPC6BQ86SZ2 158 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 OR51T1Q8NGJ9 327 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 SLC25A40Q8TBP6 338 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 BORCS8Q96FH0 119 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 RADILQ96JH8 1075 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 BCL2L14Q9BZR8 327 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 ING3Q9NXR8 418 aa16.07■□□□□ 0.16
SMPD1-203ENST00000527275 C19orf84I3L1E1 186 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 RAB3DO95716 219 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 MGMTP16455 207 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 SERPINA2P20848 420 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 RBP2P50120 134 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 TMEM50BP56557 158 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 ZP1P60852 638 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 ZBTB37Q5TC79 503 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 LHFPL2Q6ZUX7 228 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 MOB3CQ70IA8 216 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 FAM89BQ8N5H3 189 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 BEST4Q8NFU0 473 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 OR51S1Q8NGJ8 323 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 NUDCD2Q8WVJ2 157 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 DACT3Q96B18 629 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-203ENST00000527275 KCNN3Q9UGI6 736 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 PAIP2BQ9ULR5 123 aaKnown RBP16.06■□□□□ 0.16
SMPD1-203ENST00000527275 SLC7A11Q9UPY5 501 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 IGKV1-27A0A075B6S5 117 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 ZNF736B4DX44 427 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-203ENST00000527275 RBMS2Q15434 407 aaKnown RBP16.06■□□□□ 0.16
SMPD1-203ENST00000527275 FCN2Q15485 313 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 PLAC9Q5JTB6 97 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 RTN4RL2Q86UN3 420 aa16.06■□□□□ 0.16
SMPD1-203ENST00000527275 MARS2Q96GW9 593 aaKnown RBP16.06■□□□□ 0.16
SMPD1-203ENST00000527275 PRAF2O60831 178 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 GSTP1P09211 210 aaKnown RBP16.05■□□□□ 0.16
SMPD1-203ENST00000527275 FUT6P51993 359 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 KCNJ8Q15842 424 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 FBXW12Q6X9E4 464 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 TCTE3Q8IZS6 198 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 KLF14Q8TD94 323 aaPredicted RBP16.05■□□□□ 0.16
SMPD1-203ENST00000527275 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 GINS4Q9BRT9 223 aa16.05■□□□□ 0.16
SMPD1-203ENST00000527275 ESRP2Q9H6T0 727 aaKnown RBP16.05■□□□□ 0.16
SMPD1-203ENST00000527275 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-203ENST00000527275 CD74P04233 296 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 HIST1H1DP16402 221 aaKnown RBP16.04■□□□□ 0.16
SMPD1-203ENST00000527275 NKX6-1P78426 367 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-203ENST00000527275 PLCXD3Q63HM9 321 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 SLC22A25Q6T423 547 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 GVQW1Q8N7I0 195 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 BHLHE23Q8NDY6 225 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 OR4S1Q8NGB4 309 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 OR56B2PQ8NGI1 322 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 TECTBQ96PL2 329 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 TINAGL1Q9GZM7 467 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-203ENST00000527275 METTL9Q9H1A3 318 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 KCNK7Q9Y2U2 307 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 M0QYG6 137 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 HPXP02790 462 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 ATP1B3P54709 279 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 GNG2P59768 71 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 NCMAPQ5T1S8 102 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 CD276Q5ZPR3 534 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 ADAM5Q6NVV9 412 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 ARHGAP5-AS1Q96IT6 56 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms