RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NXPH2O95156 264 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CRYBA1P05813 215 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CCL3L1P16619 93 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 PAX6P26367 422 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 SAA4P35542 130 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 ATP6V1E1P36543 226 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 ALDH3A2P51648 485 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CAPZA1P52907 286 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OR12D2P58182 307 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 NANOS3P60323 173 aaKnown RBP8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CDC42P60953 191 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 SNRPGP62308 76 aaKnown RBP8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 IL24Q13007 206 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF273Q14593 569 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OCLNQ16625 522 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 SMIM21Q3B7S5 101 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OLFML2AQ68BL7 652 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 Q6ZSV7 163 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 MKXQ8IYA7 352 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 CBR4Q8N4T8 237 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF561Q8N587 486 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OR2G2Q8NGZ5 317 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OR4F5Q8NH21 305 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 RFKQ969G6 155 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 RNFT2Q96EX2 444 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 ADAT3Q96EY9 351 aaPredicted RBP8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC29A1Q99808 456 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 PKIBQ9C010 78 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 BEX1Q9HBH7 125 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 FRRS1LQ9P0K9 344 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 GNG8Q9UK08 70 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 POLDIP2Q9Y2S7 368 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
PRPF40B-204ENST00000527253 A0A1B0GUS0 222 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 LOC107986453A0A1B0GWG9 222 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 MEX3AA1L020 520 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 MEIOCA2RUB1 952 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 MEGF11A6BM72 1044 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 H0YAE9 185 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF737O75373 536 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 INMTO95050 263 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 KNG1P01042 644 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 TK1P04183 234 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 FBP1P09467 338 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 EEF1B2P24534 225 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 DLX6P56179 175 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 PROK1P58294 105 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 RPL31P62899 125 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 COL10A1Q03692 680 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 NCR3LG1Q68D85 454 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 ZSCAN4Q8NAM6 433 aaPredicted RBP8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 OR10AC1Q8NH08 325 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 LGALS12Q96DT0 336 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 CHST5Q9GZS9 411 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 DPAGT1Q9H3H5 408 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 IL36RNQ9UBH0 155 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC7A11Q9UPY5 501 aa8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 EXOGQ9Y2C4 368 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-204ENST00000527253 K7N7A8 449 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC1A7O00341 560 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC16A6O15403 523 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 WIPF1O43516 503 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 ANGPTL7O43827 346 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CALCBP10092 127 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 NPBWR2P48146 333 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 FUT6P51993 359 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 ACSM1Q08AH1 577 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 BLMHQ13867 455 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 ZFP1Q6P2D0 407 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 FDX2Q6P4F2 183 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CCDC121Q6ZUS5 278 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 SLC25A26Q70HW3 274 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CCDC54Q8NEL0 328 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 OR5D13Q8NGL4 314 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 FGGYQ96C11 551 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CEP19Q96LK0 163 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CITED1Q99966 193 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF649Q9BS31 505 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 C16orf95Q9H693 158 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 S100A14Q9HCY8 104 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 IMPAD1Q9NX62 359 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 VPREB3Q9UKI3 123 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 SF3B6Q9Y3B4 125 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
PRPF40B-204ENST00000527253 VWFP04275 2813 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 NOTCH1P46531 2555 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 IGKV1-12A0A0C4DH73 117 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 DAPL1A0PJW8 107 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms