RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 ZNF20P17024 532 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 PRKACBP22694 351 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 ERVK11-1P61568 191 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 UBE2V2Q15819 145 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 KLHL22Q53GT1 634 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 LPCAT4Q643R3 524 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 RUSC1-AS1Q66K80 236 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 NCR3LG1Q68D85 454 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 Q6YL49 198 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 Q8IYB0 196 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 PACRGLQ8N7B6 248 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 C3orf56Q8N813 242 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 ZNRF1Q8ND25 227 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 TRMT10AQ8TBZ6 339 aaKnown RBP16.97■□□□□ 0.31
VPS28-206ENST00000526734 TBC1D15Q8TC07 691 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 PELI1Q96FA3 418 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 C4orf36Q96KX1 117 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 ALG8Q9BVK2 526 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 METTL8Q9H825 291 aaKnown RBP16.97■□□□□ 0.31
VPS28-206ENST00000526734 NEK6Q9HC98 313 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 FRRS1LQ9P0K9 344 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.97■□□□□ 0.31
VPS28-206ENST00000526734 HHLA2Q9UM44 414 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 J3QLW9 94 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 ZNF19P17023 458 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 EEF1B2P24534 225 aaKnown RBP16.96■□□□□ 0.31
VPS28-206ENST00000526734 CFPP27918 469 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 PRDX2P32119 198 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 CAPZA1P52907 286 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 ATP1B3P54709 279 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 C16orf87Q6PH81 154 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 CALHM1Q8IU99 346 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 SSMEM1Q8WWF3 244 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 SPSB1Q96BD6 273 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 CEP19Q96LK0 163 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 ZNF488Q96MN9 340 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 DUX5Q96PT3 197 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 FAM234AQ9H0X4 552 aa16.96■□□□□ 0.31
VPS28-206ENST00000526734 MDFIC2A0A1B0GVS7 189 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 IRGMA1A4Y4 181 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 HOXA3O43365 443 aaPredicted RBP16.95■□□□□ 0.3
VPS28-206ENST00000526734 CYB5AP00167 134 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 RBP2P50120 134 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 RPL15P61313 204 aaKnown RBP16.95■□□□□ 0.3
VPS28-206ENST00000526734 ALKBH1Q13686 389 aaKnown RBP16.95■□□□□ 0.3
VPS28-206ENST00000526734 AWAT1Q58HT5 328 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 ANGPTL5Q86XS5 388 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 CD177Q8N6Q3 437 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 OR5D13Q8NGL4 314 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 JAM3Q9BX67 310 aa16.95■□□□□ 0.3
VPS28-206ENST00000526734 SEBOXQ9HB31 216 aaPredicted RBP16.95■□□□□ 0.3
VPS28-206ENST00000526734 SOX21Q9Y651 276 aaPredicted RBP16.95■□□□□ 0.3
VPS28-206ENST00000526734 ANK2Q01484 3957 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 OR4C45A6NMZ5 311 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 TFF1P04155 84 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 MELTFP08582 738 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 CCDC159P0C7I6 412 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 NANOS3P60323 173 aaKnown RBP16.94■□□□□ 0.3
VPS28-206ENST00000526734 TTC23Q5W5X9 447 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 FIP1L1Q6UN15 594 aaKnown RBP16.94■□□□□ 0.3
VPS28-206ENST00000526734 LHFPL2Q6ZUX7 228 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 LDLRAD3Q86YD5 345 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 MKXQ8IYA7 352 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 RDH10Q8IZV5 341 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 Q8N7P7 452 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 ZNF676Q8N7Q3 588 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 ADAT3Q96EY9 351 aaPredicted RBP16.94■□□□□ 0.3
VPS28-206ENST00000526734 SIRT7Q9NRC8 400 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 ERVK13-1Q9NX77 482 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 AASSQ9UDR5 926 aa16.94■□□□□ 0.3
VPS28-206ENST00000526734 hCG_1809904A0A1W2PP81 198 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 A0A1W2PPE2 198 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 A0A1W2PR64 198 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 A0A1W2PRV1 198 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 TMEM212A6NML5 194 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 H3BSH0 61 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 CHRM2P08172 466 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 OCM2P0CE71 109 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 OCMP0CE72 109 aaPredicted RBP16.93■□□□□ 0.3
VPS28-206ENST00000526734 ATF1P18846 271 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 GBX2P52951 348 aaPredicted RBP16.93■□□□□ 0.3
VPS28-206ENST00000526734 ACSM1Q08AH1 577 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 LHFPL3Q86UP9 236 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 FAM185AQ8N0U4 392 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 SETD9Q8NE22 299 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 COMMD4Q9H0A8 199 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 MYRFQ9Y2G1 1151 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 FAM96BQ9Y3D0 163 aa16.93■□□□□ 0.3
VPS28-206ENST00000526734 IGKV1-27A0A075B6S5 117 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 MT-ND2P03891 347 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 FBP1P09467 338 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 AZGP1P25311 298 aaKnown RBP16.92■□□□□ 0.3
VPS28-206ENST00000526734 UBE2E1P51965 193 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 RPL31P62899 125 aaKnown RBP16.92■□□□□ 0.3
VPS28-206ENST00000526734 SLC25A26Q70HW3 274 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 OR52I1Q8NGK6 324 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 OR13C3Q8NGS6 347 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 APH1BQ8WW43 257 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 TNFRSF14Q92956 283 aa16.92■□□□□ 0.3
VPS28-206ENST00000526734 FGGYQ96C11 551 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms