RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 PGAM1P18669 254 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 GNRHRP30968 328 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 GGT2P36268 569 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 NDUFA8P51970 172 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 CRADDP78560 199 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 NAB1Q13506 487 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 PNOCQ13519 176 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 DEFB116Q30KQ4 102 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 STEAP4Q687X5 459 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 FAM71E1Q6IPT2 247 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 PGAM4Q8N0Y7 254 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 CA13Q8N1Q1 262 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 LILRB4Q8NHJ6 448 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 RXFP4Q8TDU9 374 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 CCDC124Q96CT7 223 aaKnown RBP2.64□□□□□ -1.99
CD44-223ENST00000526553 ATP6V1G3Q96LB4 118 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 FAM19A4Q96LR4 140 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 RTBDNQ9BSG5 229 aaPredicted RBP2.64□□□□□ -1.99
CD44-223ENST00000526553 SFXN3Q9BWM7 321 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 SAMD10Q9BYL1 202 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 PORCNQ9H237 461 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 FBXO8Q9NRD0 319 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 ACOT9Q9Y305 439 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 TIAM2Q8IVF5 1701 aa2.64□□□□□ -1.99
CD44-223ENST00000526553 CICQ96RK0 1608 aaPredicted RBP2.64□□□□□ -1.99
CD44-223ENST00000526553 DICER1Q9UPY3 1922 aaKnown RBP2.64□□□□□ -1.99
CD44-223ENST00000526553 MAP2P11137 1827 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 VIRMAQ69YN4 1812 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 KIAA1551Q9HCM1 1747 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 TOGARAM1Q9Y4F4 1720 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 NSD3Q9BZ95 1437 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 LINC00854A0A1B0GVQ3 168 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 ZNF593O00488 134 aaPredicted RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 PSPHP1O15172 72 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 SOCS1O15524 211 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 CHST10O43529 356 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 FOXH1O75593 365 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 SMC2O95347 1197 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 CD70P32970 193 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 APLNRP35414 380 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 RPS9P46781 194 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 MLF1P58340 268 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 DSTNP60981 165 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 CACNG7P62955 275 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 CDK5Q00535 292 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 LOXL1Q08397 574 aaPredicted RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 GPR176Q14439 515 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 TAL2Q16559 108 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 SMUG1Q53HV7 270 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 MPV17L2Q567V2 206 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 MFSD14CQ5VZR4 134 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 BHLHA15Q7RTS1 189 aaPredicted RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 SLC7A5P1Q8MH63 180 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 SYCE1Q8N0S2 351 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 GPR26Q8NDV2 337 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 ANP32BQ92688 251 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 SMARCD1Q96GM5 515 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 NARS2Q96I59 477 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 UTP23Q9BRU9 249 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 NDFIP1Q9BT67 221 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 RSG1Q9BU20 258 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 TMEM243Q9BU79 118 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 ARV1Q9H2C2 271 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 GOLPH3Q9H4A6 298 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 ZNF229Q9UJW7 825 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 SLC7A11Q9UPY5 501 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 PXDNLA1KZ92 1463 aa2.63□□□□□ -1.99
CD44-223ENST00000526553 AFDNP55196 1824 aaKnown RBP2.63□□□□□ -1.99
CD44-223ENST00000526553 C4AP0C0L4 1744 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 TRAV8-7A0A075B6U6 113 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 TRAV8-4A0A0B4J246 113 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 TMEM223A0PJW6 202 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 KRBOX1C9JBD0 128 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 GLSO94925 669 aaPredicted RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 P01737 135 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 APCSP02743 223 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 MMP7P09237 267 aaPredicted RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 ZNF688P0C7X2 276 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 CXCR1P25024 350 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 ANP32AP39687 249 aaKnown RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 RGS6P49758 472 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 MTPNP58546 118 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 VSNL1P62760 191 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 IFFO1Q0D2I5 559 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 RBMY1FQ15415 496 aaKnown RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 NDUFAF6Q330K2 333 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 FAM27D1Q5T7N8 215 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 FBXW9Q5XUX1 488 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 APOBEC3HQ6NTF7 200 aaKnown RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 FAHD1Q6P587 224 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 DEGS2Q6QHC5 323 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 NTM-AS1Q6ZSK4 140 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 COPS6Q7L5N1 327 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 SLC16A13Q7RTY0 426 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 MDP1Q86V88 176 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 DRAXINQ8NBI3 349 aaPredicted RBP2.62□□□□□ -1.99
CD44-223ENST00000526553 OR1J4Q8NGS1 313 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 ENKURQ8TC29 256 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 DOK4Q8TEW6 326 aa2.62□□□□□ -1.99
CD44-223ENST00000526553 ZNF721Q8TF20 911 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms