RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 LRPPRCP42704 1394 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ROCK1Q13464 1354 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PALLDQ8WX93 1383 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 DOCK9Q9BZ29 2069 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 KIF27Q86VH2 1401 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 IGHV3-49A0A0A0MS15 119 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 IGKV2-24A0A0C4DH68 120 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 IGHV7-4-1A0A0J9YVY3 117 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A0J9YYE9 177 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 DAPL1A0PJW8 107 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FABP12A6NFH5 140 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM210A6NLX4 147 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 NCBP2LA6PVI3 153 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 E7EWF7 191 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 F5H5T6 163 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 H0Y980 276 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 H0YJX3 145 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 H7C417 338 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 K7EN84 100 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 hCG_2039718K7EN88 272 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 K7EQS6 105 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PGRMC1O00264 195 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GABRPO00591 440 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TCAPO15273 167 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CST8O60676 142 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ALOX12BO75342 701 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ENTPD6O75354 484 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SCO1O75880 301 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 DHRS3O75911 302 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 VAPBO95292 243 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PLEKHA8P1O95397 391 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TDP2O95551 362 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB36O95755 333 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TTC4O95801 387 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINA1P01009 418 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GCGP01275 180 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TRBC1P01850 177 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 HLA-DRAP01903 254 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RLN2P04090 185 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CD74P04233 296 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TYMSP04818 313 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CDK1P06493 297 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FABP1P07148 127 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CTSLP07711 333 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SNRPAP09012 282 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FAM228BP0C875 321 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC2A1P11166 492 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MLNP12872 115 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CCL2P13500 99 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ATF1P18846 271 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ATF6P18850 670 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CSNK2A2P19784 350 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ME2P23368 584 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RPS12P25398 132 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PSMB5P28074 263 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINB1P30740 379 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ALDH3A1P30838 453 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 KDELR2P33947 212 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 APLNRP35414 380 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OPRK1P41145 380 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ACTR1BP42025 376 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CRATP43155 626 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MAGEA6P43360 314 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MAGEA12P43365 314 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CBX5P45973 191 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CXCL12P48061 93 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PSMB2P49721 201 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GNG10P50151 68 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINB8P50452 374 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 XKP51811 444 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CCL23P55773 120 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TAS2R39P59534 338 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TAS2R60P59551 318 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR2B8PP59922 312 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TSPAN5P62079 268 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RPS15AP62244 130 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RPS23P62266 143 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 BTN3A2P78410 334 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CRADDP78560 199 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 IL5RAQ01344 420 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PRKCDQ05655 676 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 LOXL1Q08397 574 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SYCNQ0VAF6 134 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ADIGQ0VDE8 80 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 LAMTOR4Q0VGL1 99 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 BNIP2Q12982 314 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 BTN1A1Q13410 526 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB31Q13636 194 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ITIH4Q14624 930 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TAF1AQ15573 450 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TRAM1Q15629 374 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 VAMP3Q15836 100 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MPV17L2Q567V2 206 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM31Q5JXX7 168 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CLEC12AQ5QGZ9 265 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RESP18Q5W5W9 173 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR2T5Q6IEZ7 315 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FAM173BQ6P4H8 233 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GUSBP11Q6P575 273 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PLET1Q6UQ28 207 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms