RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ACTA1P68133 377 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SCRN3Q0VDG4 424 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ST3GAL4Q11206 333 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 EIF2B1Q14232 305 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 ENDOGQ14249 297 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 TAF13Q15543 124 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PCK2Q16822 640 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PNLIPRP3Q17RR3 467 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 FBXL19-AS1Q494R0 122 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 HIKESHIQ53FT3 197 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 TIMM23BQ5SRD1 257 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OTPQ5XKR4 325 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 TMEM53Q6P2H8 277 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CORO6Q6QEF8 472 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SSX8Q7RTT4 187 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 DPY19L4Q7Z388 723 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CENPVQ7Z7K6 275 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CDC20BQ86Y33 519 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 FAM219AQ8IW50 185 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PHC2Q8IXK0 858 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SLC35F2Q8IXU6 374 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 TIGD4Q8IY51 512 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 C17orf78Q8N4C9 275 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ACBD7Q8N6N7 88 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 WDR31Q8NA23 367 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 DMBX1Q8NFW5 382 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR10H4Q8NGA5 316 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR4F15Q8NGB8 312 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR52I1Q8NGK6 324 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR6N2Q8NGY6 317 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR52N5Q8NH56 324 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OTOSQ8NHW6 89 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SMAP2Q8WU79 429 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 HSD17B8Q92506 261 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 NABP1Q96AH0 204 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 S100PBPQ96BU1 408 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 LGALS12Q96DT0 336 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 FBXO17Q96EF6 278 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 MRPL48Q96GC5 212 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 CNN2Q99439 309 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 NEURL2Q9BR09 285 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 COPS4Q9BT78 406 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ZNF416Q9BWM5 594 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 GON7Q9BXV9 100 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 GPR61Q9BZJ8 451 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ACTR6Q9GZN1 396 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 MMP28Q9H239 520 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 C1orf198Q9H425 327 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 DUSP21Q9H596 190 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 MARCH7Q9H992 704 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ADGRL4Q9HBW9 690 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 FGF20Q9NP95 211 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 SLC17A5Q9NRA2 495 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 B3GNT2Q9NY97 397 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CNOT2Q9NZN8 540 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 CYB5R1Q9UHQ9 305 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 POLR1DQ9Y2S0 133 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 LHFPL6Q9Y693 200 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 BOD1L1Q8NFC6 3051 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 NCOA6Q14686 2063 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 TPRP12270 2363 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 COL6A6A6NMZ7 2263 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 PKD1L2Q7Z442 2459 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 LOC100509620A0A075B734 347 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 A0A1W2PQL4 384 aaPredicted RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 FAM172BPA6NC97 362 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 TUBAL3A6NHL2 446 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 METTL15A6NJ78 407 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 FAM90A26D6RGX4 464 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 J3QRE1 110 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 CASKO14936 926 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 RER1O15258 196 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SGCEO43556 437 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 MRPS14O60783 128 aaKnown RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 SCGB2A1O75556 95 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 RAB36O95755 333 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 HLA-HP01893 362 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SERPINA5P05154 406 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 LIPFP07098 398 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 LYNP07948 512 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 MMP7P09237 267 aaPredicted RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 H2BFMP0C1H6 154 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 PIPP12273 146 aaPredicted RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 ZNF32P17041 273 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 MYL12AP19105 171 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 AZGP1P25311 298 aaKnown RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 HIST1H3AP68431 136 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SLC35A2P78381 396 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 PSG4Q00888 419 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ACSM1Q08AH1 577 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ECH1Q13011 328 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 AQP6Q13520 282 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ZMYND11Q15326 602 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 TAB1Q15750 504 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 GSG1Q2KHT4 349 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms