RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 OR2AT4A6NND4 320 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 A8MXK9 166 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 SYNGR1O43759 233 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 NXPH2O95156 264 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 MSMBP08118 114 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 CD80P33681 288 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 BMXP51813 675 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 SYT6Q5T7P8 510 aaPredicted RBP10.33□□□□□ -0.76
CCS-202ENST00000525435 STUMQ69YW2 141 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 FAM166AQ6J272 317 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 ACP7Q6ZNF0 438 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 PXT1Q8NFP0 134 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 OR13C5Q8NGS8 318 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 CEP19Q96LK0 163 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 DMRTB1Q96MA1 342 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 NR1H4Q96RI1 486 aaPredicted RBP10.33□□□□□ -0.76
CCS-202ENST00000525435 TMED9Q9BVK6 235 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 WDR13Q9H1Z4 485 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 ZNF696Q9H7X3 374 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 NOX4Q9NPH5 578 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 SF3B6Q9Y3B4 125 aaKnown RBP10.33□□□□□ -0.76
CCS-202ENST00000525435 MALRD1Q5VYJ5 2156 aa10.33□□□□□ -0.76
CCS-202ENST00000525435 A8MV72 311 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 FAM157AC9JC47 383 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 TRAPPC2LH3BP13 241 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 CCRL2O00421 344 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PIN1P1O15428 100 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ADAM20O43506 726 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ARL6IP5O75915 188 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 KDM4BO94953 1096 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ECDO95905 644 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 KNG1P01042 644 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 GYPAP02724 150 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 UCHL1P09936 223 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 CD37P11049 281 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PSG2P11465 335 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 SRMP19623 302 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ZNF93P35789 620 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 RBMXP38159 391 aaKnown RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 RANBP1P43487 201 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PITPNBP48739 271 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ZP1P60852 638 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 HNRNPA0Q13151 305 aaKnown RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 CD276Q5ZPR3 534 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ELP2Q6IA86 826 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 CRIP3Q6Q6R5 217 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 FIP1L1Q6UN15 594 aaKnown RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 ASCL4Q6XD76 172 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 ZNF788Q6ZQV5 615 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 GLCCI1Q86VQ1 547 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 NKAIN3Q8N8D7 197 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 C19orf18Q8NEA5 215 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 Q8NFD4 153 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 OR52N4Q8NGI2 321 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 OR51A2Q8NGJ7 313 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 FOXRED1Q96CU9 486 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 SDSLQ96GA7 329 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 SMR3AQ99954 134 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 GSX1Q9H4S2 264 aaPredicted RBP10.32□□□□□ -0.76
CCS-202ENST00000525435 TCF7L1Q9HCS4 588 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 VCX3AQ9NNX9 186 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PCDHB16Q9NRJ7 776 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 NDUFB11Q9NX14 153 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 CLN8Q9UBY8 286 aa10.32□□□□□ -0.76
CCS-202ENST00000525435 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.762e-13■■□□□ 13.8
CCS-202ENST00000525435 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
CCS-202ENST00000525435 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 IGHV3OR15-7A0A075B7D8 119 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TRDV1A0A1B0GX56 115 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 A0A1W2PPK0 400 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 NKX6-3A6NJ46 265 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 J3QLI3 93 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TMPRSS2O15393 492 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 RGS9O75916 674 aaPredicted RBP10.31□□□□□ -0.76
CCS-202ENST00000525435 LIPFP07098 398 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TMEM225BP0DP42 221 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 PRDX2P32119 198 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 PTGFRP43088 359 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 POU3F4P49335 361 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 PSMD7P51665 324 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 GNB2P62879 340 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 IL13RA1P78552 427 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 SSX1Q16384 188 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 SPIN3Q5JUX0 258 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 DDI2Q5TDH0 399 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
CCS-202ENST00000525435 LYPD2Q6UXB3 125 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TMEM91Q6ZNR0 172 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
CCS-202ENST00000525435 TMEM203Q969S6 136 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms