RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 AWAT1Q58HT5 328 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 DMKNQ6E0U4 476 aaPredicted RBP10.37□□□□□ -0.75
SMCO4-202ENST00000525141 XAF1Q6GPH4 301 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 BTNL3Q6UXE8 466 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 KCTD8Q6ZWB6 473 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF573Q86YE8 665 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 OR10Z1Q8NGY1 313 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 FGGYQ96C11 551 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 TBX15Q96SF7 602 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 PDCD1LG2Q9BQ51 273 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 CHST5Q9GZS9 411 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 MS4A7Q9GZW8 240 aaPredicted RBP10.37□□□□□ -0.75
SMCO4-202ENST00000525141 PAK1IP1Q9NWT1 392 aaPredicted RBP10.37□□□□□ -0.75
SMCO4-202ENST00000525141 SLC7A11Q9UPY5 501 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 PKD1L1Q8TDX9 2849 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 TRAV38-1A0A0B4J264 116 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 PQLC2LA1A4F0 135 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 H3BSH0 61 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 MYL12BO14950 172 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ADAM20O43506 726 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 NDUFA2O43678 99 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ALX3O95076 343 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 LALBAP00709 142 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 CD1AP06126 327 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 SFTPBP07988 381 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
SMCO4-202ENST00000525141 FUT6P51993 359 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 BDH1Q02338 343 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ACSM1Q08AH1 577 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 IRF3Q14653 427 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 KCNJ8Q15842 424 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 DEFB112Q30KQ8 113 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 NLRC3Q7RTR2 1065 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 PRSS48Q7RTY5 328 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 SERPINA12Q8IW75 414 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 DNAAF1Q8NEP3 725 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 OR51A4Q8NGJ6 313 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 OR5D14Q8NGL3 314 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 OR13C3Q8NGS6 347 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 OR10AC1Q8NH08 325 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF671Q8TAW3 534 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
SMCO4-202ENST00000525141 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ADAT3Q96EY9 351 aaPredicted RBP10.36□□□□□ -0.75
SMCO4-202ENST00000525141 CCL13Q99616 98 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 MND1Q9BWT6 205 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 YTHDF1Q9BYJ9 559 aaKnown RBP10.36□□□□□ -0.75
SMCO4-202ENST00000525141 GPR173Q9NS66 373 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 KAAG1Q9UBP8 84 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 BLOC1S6Q9UL45 172 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF281Q9Y2X9 895 aa10.36□□□□□ -0.75
SMCO4-202ENST00000525141 SIRT4Q9Y6E7 314 aaPredicted RBP10.36□□□□□ -0.75
SMCO4-202ENST00000525141 CENPVL3A0A0U1RRI6 287 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 SRRM5B3KS81 715 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF879B4DU55 563 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 CLDN34H7C241 214 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 DVL1O14640 695 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 RGS10O43665 173 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 MT-ND2P03891 347 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 TFF1P04155 84 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF20P17024 532 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 NPY4RP50391 375 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 CNN3Q15417 329 aaKnown RBP10.35□□□□□ -0.75
SMCO4-202ENST00000525141 DMRTC1Q5HYR2 192 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 RUSC1-AS1Q66K80 236 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 BTN2A1Q7KYR7 527 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 PARP16Q8N5Y8 322 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 C3orf56Q8N813 242 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 OR5T2Q8NGG2 359 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 GPR148Q8TDV2 347 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 LRRC29Q8WV35 223 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 AQP3Q92482 292 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 GHSRQ92847 366 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 SIRPDQ9H106 197 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 WDR13Q9H1Z4 485 aa10.35□□□□□ -0.75
SMCO4-202ENST00000525141 TRAV40A0A0B4J280 105 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 MRPS14O60783 128 aaKnown RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 NOS1APO75052 506 aaPredicted RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 CD2P06729 351 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 LIPFP07098 398 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 ATF1P18846 271 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 PRKACBP22694 351 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 MPZP25189 248 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 HAAOP46952 286 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 ARF6P62330 175 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 GPR50Q13585 617 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 SPHARQ15513 63 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 MICBQ29980 383 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 YIF1BQ5BJH7 314 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 RBMS3Q6XE24 437 aaKnown RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 Q6YL49 198 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 RGP1Q92546 391 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms