RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MFSD8Q8NHS3 518 aa5.17□□□□□ -1.58
NEDD8-203ENST00000524927 MALSU1Q96EH3 234 aa5.17□□□□□ -1.58
NEDD8-203ENST00000524927 EGLN3Q9H6Z9 239 aa5.17□□□□□ -1.58
NEDD8-203ENST00000524927 RNPEPL1Q9HAU8 725 aa5.17□□□□□ -1.58
NEDD8-203ENST00000524927 MID1IP1Q9NPA3 183 aa5.17□□□□□ -1.58
NEDD8-203ENST00000524927 FARSBQ9NSD9 589 aaKnown RBP5.17□□□□□ -1.58
NEDD8-203ENST00000524927 PRPF19Q9UMS4 504 aaKnown RBP5.17□□□□□ -1.58
NEDD8-203ENST00000524927 IGHV3-64DA0A0J9YX35 117 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 FTCDNL1E5RQL4 147 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 FAAHO00519 579 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 OR7A17O14581 309 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 UGT2B17O75795 530 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 HMGN2P05204 90 aaKnown RBP5.16□□□□□ -1.58
NEDD8-203ENST00000524927 OR8U8P0C7N1 319 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 NCF2P19878 526 aaPredicted RBP5.16□□□□□ -1.58
NEDD8-203ENST00000524927 CXCR1P25024 350 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 MAGEA4P43358 317 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 SLC35B1P78383 322 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 EWSR1Q01844 656 aaKnown RBP eCLIP5.16□□□□□ -1.58
NEDD8-203ENST00000524927 UAP1Q16222 522 aaPredicted RBP5.16□□□□□ -1.58
NEDD8-203ENST00000524927 ZNF74Q16587 644 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 LGALS9BQ3B8N2 356 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 SPIN4Q56A73 249 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 PABPC1L2AQ5JQF8 200 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 C1orf140Q5VVS0 124 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 DRAM1Q8N682 238 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 ARFGAP2Q8N6H7 521 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 OR4K5Q8NGD3 323 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 C1orf54Q8WWF1 131 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 CAPSLQ8WWF8 208 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 SELENOMQ8WWX9 145 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 HAVCR1Q96D42 359 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 CMBLQ96DG6 245 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 SDF2Q99470 211 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 TMED9Q9BVK6 235 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 RNF14Q9UBS8 474 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 PRDM4Q9UKN5 801 aa5.16□□□□□ -1.58
NEDD8-203ENST00000524927 IGHV4-4A0A075B6R2 117 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 F5H5P2 479 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 NPIPB7O75200 414 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 BCAS1O75363 584 aaPredicted RBP5.15□□□□□ -1.59
NEDD8-203ENST00000524927 CNIH1O95406 144 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 GYPAP02724 150 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 KRT16P08779 473 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 ANXA4P09525 319 aaPredicted RBP5.15□□□□□ -1.59
NEDD8-203ENST00000524927 ANOS1P23352 680 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 LASP1Q14847 261 aaKnown RBP5.15□□□□□ -1.59
NEDD8-203ENST00000524927 IFI44LQ53G44 452 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 CFAP157Q5JU67 520 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 FAM71E1Q6IPT2 247 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 FAM53AQ6NSI3 398 aaPredicted RBP5.15□□□□□ -1.59
NEDD8-203ENST00000524927 LHFPL4Q7Z7J7 247 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 FGFRL1Q8N441 504 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 FAM89BQ8N5H3 189 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 NAT8LQ8N9F0 302 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 SMYD1Q8NB12 490 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 OR8G5Q8NG78 346 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 TMEM106AQ96A25 262 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 CCDC42Q96M95 316 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 NAT9Q9BTE0 207 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 EMC6Q9BV81 110 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 ALG9Q9H6U8 611 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 HEXA-AS1Q9H8Q6 139 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 SNX6Q9UNH7 406 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 TBL2Q9Y4P3 447 aaKnown RBP5.15□□□□□ -1.59
NEDD8-203ENST00000524927 LRP12Q9Y561 859 aa5.15□□□□□ -1.59
NEDD8-203ENST00000524927 A0A096LPI6 279 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 A0A0J9YWU9 116 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 TRBV4-1A0A0J9YWV2 114 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 ZNF726A6NNF4 738 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 SYCE1LA8MT33 242 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 OVOL1O14753 267 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 AIM2O14862 343 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 NDUFB3O43676 98 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 STX11O75558 287 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 RHBDL1O75783 438 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 AHSA1O95433 338 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 GYPCP04921 128 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 UQCRBP14927 111 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 OR3A3P47888 321 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 CSNK1A1P48729 337 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 SLC34A1Q06495 639 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 GABPB1Q06547 395 aaPredicted RBP5.14□□□□□ -1.59
NEDD8-203ENST00000524927 FASTKD3Q14CZ7 662 aaKnown RBP5.14□□□□□ -1.59
NEDD8-203ENST00000524927 MAPK11Q15759 364 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 SLC25A47Q6Q0C1 308 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 BAIAP2L2Q6UXY1 529 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 DHDDSQ86SQ9 333 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 UBL4BQ8N7F7 174 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 TCEANCQ8N8B7 351 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 OR11H1Q8NG94 326 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 C4orf3Q8WVX3 66 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 LGALS12Q96DT0 336 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 GPR173Q9NS66 373 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 ZCCHC3Q9NUD5 404 aaKnown RBP5.14□□□□□ -1.59
NEDD8-203ENST00000524927 ELF5Q9UKW6 265 aaPredicted RBP5.14□□□□□ -1.59
NEDD8-203ENST00000524927 KCNE3Q9Y6H6 103 aa5.14□□□□□ -1.59
NEDD8-203ENST00000524927 A0A087WUV0 522 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms