RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 OR1E1P30953 314 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 POLR2IP36954 125 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 CXCL5P42830 114 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CSNK1DP48730 415 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 LHX2P50458 406 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 STXBP1P61764 594 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 EMX2Q04743 252 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 ADIGQ0VDE8 80 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 EIF4EBP2Q13542 120 aaPredicted RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 NDUFA5Q16718 116 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TMEM183BQ1AE95 376 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TTLL9Q3SXZ7 439 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CCNJQ5T5M9 372 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 PIP5KL1Q5T9C9 394 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 C16orf87Q6PH81 154 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 ZNF493Q6ZR52 646 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 ZNF429Q86V71 674 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TMEM183AQ8IXX5 376 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CPNE9Q8IYJ1 553 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CCNYL1Q8N7R7 359 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TTC29Q8NA56 475 aaPredicted RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 OR51G1Q8NGK1 321 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 OR9I1Q8NGQ6 314 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 OR52E5Q8NH55 327 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 OR6X1Q8NH79 312 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CYGBQ8WWM9 190 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 KIAA1143Q96AT1 154 aaPredicted RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 PPWD1Q96BP3 646 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 TAMM41Q96BW9 452 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 GLT1D1Q96MS3 346 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 DCUN1D5Q9BTE7 237 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 MRPL37Q9BZE1 423 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 GABARAPL1Q9H0R8 117 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 NTN4Q9HB63 628 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 FANCEQ9HB96 536 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 TMEM165Q9HC07 324 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 HEBP1Q9NRV9 189 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 CCDC59Q9P031 241 aaKnown RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 CCDC167Q9P0B6 97 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 ZNF629Q9UEG4 869 aaPredicted RBP3.9□□□□□ -1.79
SKP1-213ENST00000524288 AP3M1Q9Y2T2 418 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 Q9Y3F1 56 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 HSPE1-MOB4S4R3N1 261 aa3.9□□□□□ -1.79
SKP1-213ENST00000524288 KBTBD11-OT1A0A1B0GTJ5 212 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 A0A1B0GTQ1 180 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 A0A1W2PNU3 283 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 FAM92AA1XBS5 289 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ISPDA4D126 451 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 FAM166BA8MTA8 275 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 C11orf94C9JXX5 98 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 H0YC42 278 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 J3QRK9 145 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 SLC9A3R1O14745 358 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 AZIN1O14977 448 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 PFDN6O15212 129 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CA11O75493 328 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CLDN11O75508 207 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CDK14O94921 469 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 SNAP29O95721 258 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 SNAI1O95863 264 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 IGLV2-23P01705 113 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 BGLAPP02818 100 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 TFPTP0C1Z6 253 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 GGT1P19440 569 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 OGNP20774 298 aaKnown RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 CD40LGP29965 261 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 OR1G1P47890 313 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CXCR4P61073 352 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 FADDQ13158 208 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 GGTLC2Q14390 218 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 TRAM2Q15035 370 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ZNF726P1Q15940 193 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 HIKESHIQ53FT3 197 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 PYCR3Q53H96 274 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 BRMS1LQ5PSV4 323 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 SYPL2Q5VXT5 272 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ZNF470Q6ECI4 717 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 LAIR2Q6ISS4 152 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 TTC23LQ6PF05 361 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 C12orf54Q6X4T0 127 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 PLEKHG7Q6ZR37 379 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CLEC20AQ6ZU45 233 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 C8orf59Q8N0T1 100 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 STPG2Q8N412 459 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ZNF433Q8N7K0 673 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 ARIH2OSQ8N7S6 290 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 LINC01555Q8NAE3 123 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 OR8J3Q8NGG0 315 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 OR9G4Q8NGQ1 327 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 OR6Q1Q8NGQ2 317 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 PPTC7Q8NI37 304 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 DYNC2LI1Q8TCX1 351 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 TWIST2Q8WVJ9 160 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 YIPF6Q96EC8 236 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 PPP1R36Q96LQ0 422 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 TSSK3Q96PN8 268 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms