RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 TXNIPQ9H3M7 391 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 MAP1LC3AQ9H492 121 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 RWDD2AQ9UIY3 292 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 RIMS3Q9UJD0 308 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 MOKQ9UQ07 419 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 GOLT1BQ9Y3E0 138 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 ALG5Q9Y673 324 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 SLC22A7Q9Y694 548 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 ZNF318Q5VUA4 2279 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 CCNB3Q8WWL7 1395 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 PLEKHG1Q9ULL1 1385 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 BRCA1P38398 1863 aaKnown RBP3.6□□□□□ -1.83
SKP1-211ENST00000523359 CNTLNQ9NXG0 1405 aa3.6□□□□□ -1.83
SKP1-211ENST00000523359 CEACAM18A8MTB9 384 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 B4DXG7 233 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 ANKRD65E5RJM6 399 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 PHYHO14832 338 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 RAD51CO43502 376 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 FKBP6O75344 327 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 EIF3GO75821 320 aaKnown RBP eCLIP3.59□□□□□ -1.83
SKP1-211ENST00000523359 CRYZL1O95825 349 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 HPRT1P00492 218 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 AKR1C4P17516 323 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 USF1P22415 310 aaPredicted RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 WARSP23381 471 aaKnown RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 F8A1P23610 371 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 F2RP25116 425 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 RPL5P46777 297 aaKnown RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 GSSP48637 474 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 RAB7AP51149 207 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 EFNA3P52797 238 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 RAB38P57729 211 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 RAB25P57735 213 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 CDC42P60953 191 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 IGLV3-21P80748 117 aaPredicted RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 FMODQ06828 376 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 ZNF235Q14590 738 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 KCNJ11Q14654 390 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 GINS1Q14691 196 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 TRIP13Q15645 432 aaPredicted RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 LRRC75BQ2VPJ9 315 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 TPTE2P1Q5T6R2 138 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 HIST2H3PS2Q5TEC6 136 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 SMARCD3Q6STE5 483 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 GAPTQ8N292 157 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 ATPAF2Q8N5M1 289 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 C11orf42Q8N5U0 333 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 OR10G3Q8NGC4 313 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 C11orf40Q8WZ69 217 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 PAGE5Q96GU1 130 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 C20orf144Q9BQM9 153 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 HES7Q9BYE0 225 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 SLC19A3Q9BZV2 496 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 MS4A6AQ9H2W1 248 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 UGT1A8Q9HAW9 530 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 VPS29Q9UBQ0 182 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
SKP1-211ENST00000523359 ZNF256Q9Y2P7 627 aaPredicted RBP3.59□□□□□ -1.83
SKP1-211ENST00000523359 SCAPERQ9BY12 1400 aa3.59□□□□□ -1.84
SKP1-211ENST00000523359 ARAP1Q96P48 1450 aa3.59□□□□□ -1.84
SKP1-211ENST00000523359 RFPL4AA6NLU0 287 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 NCBP2LA6PVI3 153 aaKnown RBP3.58□□□□□ -1.84
SKP1-211ENST00000523359 LINC00587B1AMM8 73 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 E9PLD3 99 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 RFPL4AL1F8VTS6 287 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 TNFRSF11BO00300 401 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 MBTPS2O43462 519 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 PLIN3O60664 434 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 ICOSLGO75144 302 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 CNMDO75829 334 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 APOC1P02654 83 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 ARG1P05089 322 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 CRYGDP07320 174 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 CD55P08174 381 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 GRPRP30550 384 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 GALR1P47211 349 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 SUB1P53999 127 aaKnown RBP eCLIP3.58□□□□□ -1.84
SKP1-211ENST00000523359 OR12D2P58182 307 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 SNAP25P60880 206 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 OR7A5Q15622 319 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 OLFML2AQ68BL7 652 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 C3orf62Q6ZUJ4 267 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 GLT6D1Q7Z4J2 308 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 SLC34A3Q8N130 599 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 OR8G5Q8NG78 346 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 OR2Z1Q8NG97 314 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 OR2A1Q8NGT9 310 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 ZFAND1Q8TCF1 268 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 Q8WTZ3 238 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 TRUB1Q8WWH5 349 aaKnown RBP3.58□□□□□ -1.84
SKP1-211ENST00000523359 ASB13Q8WXK3 278 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 FGF14Q92915 247 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 DYNLL2Q96FJ2 89 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 SEC22CQ9BRL7 303 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 RBM22Q9NW64 420 aaKnown RBP eCLIP3.58□□□□□ -1.84
SKP1-211ENST00000523359 TAS2R13Q9NYV9 303 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 MRC2Q9UBG0 1479 aa3.58□□□□□ -1.84
SKP1-211ENST00000523359 IGLV8-61A0A075B6I0 122 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms