RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TFAP2CQ92754 450 aa13.54□□□□□ -0.24
PABPC1-221ENST00000522720 SDSLQ96GA7 329 aa13.54□□□□□ -0.24
PABPC1-221ENST00000522720 WDFY2Q96P53 400 aa13.54□□□□□ -0.24
PABPC1-221ENST00000522720 PCGF1Q9BSM1 259 aa13.54□□□□□ -0.24
PABPC1-221ENST00000522720 MS4A7Q9GZW8 240 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-221ENST00000522720 SLC25A10Q9UBX3 287 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-221ENST00000522720 MAB21L2Q9Y586 359 aa13.54□□□□□ -0.24
PABPC1-221ENST00000522720 IGHV3OR16-10A0A075B7F0 116 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 TRAV40A0A0B4J280 105 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 IGKV1-9A0A0C4DH69 117 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 RFPL4AA6NLU0 287 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 TMEM212A6NML5 194 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 RFPL4AL1F8VTS6 287 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 TOX4O94842 621 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 NXPH2O95156 264 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 ZFPL1O95159 310 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 SFTPBP07988 381 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 GNAO1P09471 354 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 ZNF20P17024 532 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 ETV1P50549 477 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 ERVK11-1P61568 191 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 ARF6P62330 175 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 CNN3Q15417 329 aaKnown RBP13.53□□□□□ -0.24
PABPC1-221ENST00000522720 METTL11BQ5VVY1 283 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 OR51A4Q8NGJ6 313 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 C8orf46Q8TAG6 207 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 BORCS8Q96FH0 119 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 TBX15Q96SF7 602 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 DCTN5Q9BTE1 182 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 SIRPDQ9H106 197 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 HES4Q9HCC6 221 aa13.53□□□□□ -0.24
PABPC1-221ENST00000522720 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-221ENST00000522720 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.25
PABPC1-221ENST00000522720 ATF1P18846 271 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 PRKACBP22694 351 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 PRDX2P32119 198 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 RBP2P50120 134 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 BPIFB3P59826 476 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 GPR157Q5UAW9 335 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
PABPC1-221ENST00000522720 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 C8orf59Q8N0T1 100 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-221ENST00000522720 ZNRF1Q8ND25 227 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 OR13C3Q8NGS6 347 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 OR5AK2Q8NH90 309 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 SPSB1Q96BD6 273 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 MTCH1Q9NZJ7 389 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 DIMT1Q9UNQ2 313 aaKnown RBP13.52□□□□□ -0.25
PABPC1-221ENST00000522720 EXOSC1Q9Y3B2 195 aaKnown RBP13.52□□□□□ -0.25
PABPC1-221ENST00000522720 KPTNQ9Y664 436 aa13.52□□□□□ -0.25
PABPC1-221ENST00000522720 TRBV2A0A0J9YWF9 115 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 KNG1P01042 644 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 MT-ND2P03891 347 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 NDUFB7P17568 137 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-221ENST00000522720 ATP1B3P54709 279 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 MED21Q13503 144 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 PDCD1Q15116 288 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 CCDC58Q4VC31 144 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 LAIR2Q6ISS4 152 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 SLC25A26Q70HW3 274 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 CD177Q8N6Q3 437 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 SIGLECL1Q8N7X8 197 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 ZDHHC22Q8N966 263 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 FBLIM1Q8WUP2 373 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 H1FXQ92522 213 aaKnown RBP13.51□□□□□ -0.25
PABPC1-221ENST00000522720 GGHQ92820 318 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 TMEM80Q96HE8 168 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 CEP19Q96LK0 163 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-221ENST00000522720 PDCD1LG2Q9BQ51 273 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 ESM1Q9NQ30 184 aa13.51□□□□□ -0.25
PABPC1-221ENST00000522720 CENPVL3A0A0U1RRI6 287 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 TRIM77I1YAP6 450 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 MYL12AP19105 171 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 AZGP1P25311 298 aaKnown RBP13.5□□□□□ -0.25
PABPC1-221ENST00000522720 MTCP1P56278 107 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 OR2G6Q5TZ20 316 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 RPL22L1Q6P5R6 122 aaKnown RBP13.5□□□□□ -0.25
PABPC1-221ENST00000522720 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 LHFPL2Q6ZUX7 228 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 MKXQ8IYA7 352 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 BATF2Q8N1L9 274 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 ZNF561Q8N587 486 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 KIR3DL3Q8N743 410 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 TMEM185AQ8NFB2 350 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 FAM216AQ8WUB2 273 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 SLAMF9Q96A28 289 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 OPALINQ96PE5 141 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 ZCCHC4Q9H5U6 513 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 CHCHD3Q9NX63 227 aaKnown RBP13.5□□□□□ -0.25
PABPC1-221ENST00000522720 BABAM2Q9NXR7 383 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 CLEC2DQ9UHP7 191 aa13.5□□□□□ -0.25
PABPC1-221ENST00000522720 SOX21Q9Y651 276 aaPredicted RBP13.5□□□□□ -0.25
PABPC1-221ENST00000522720 EFCAB10A6NFE3 127 aa13.49□□□□□ -0.25
PABPC1-221ENST00000522720 F8VVB4 439 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms