RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 MS4A2Q01362 244 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 LCN8Q6JVE9 175 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 C16orf89Q6UX73 402 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 COMMD2Q86X83 199 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 CALHM1Q8IU99 346 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 OR5AU1Q8NGC0 362 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 GIPC3Q8TF64 312 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 FOXRED1Q96CU9 486 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 TTTY10Q9BZA0 68 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 ABCB10Q9NRK6 738 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 GPR173Q9NS66 373 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 ENPP5Q9UJA9 477 aa12.25□□□□□ -0.45
TRAPPC9-213ENST00000522504 ACOD1A6NK06 481 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 GSC2O15499 205 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ZNF737O75373 536 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 PEX14O75381 377 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 DCTN3O75935 186 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 MRPL3P09001 348 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ZNF728P0DKX0 622 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ATP6V1B1P15313 513 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 DYNLT3P51808 116 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ERVK11-1P61568 191 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 COL10A1Q03692 680 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ZNF684Q5T5D7 378 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 TMEM42Q69YG0 159 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ASRGL1Q7L266 308 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ANGPTL5Q86XS5 388 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 ZNF573Q86YE8 665 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 OR13D1Q8NGV5 346 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 COPS3Q9UNS2 423 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 HILPDAQ9Y5L2 63 aa12.24□□□□□ -0.45
TRAPPC9-213ENST00000522504 CCDC182A6NF36 153 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 FAM90A22PA8MWA6 464 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 MAGEB4O15481 346 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 SRSF10O75494 262 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 DHRS3O75911 302 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 TTRP02766 147 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 MPZP25189 248 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 RPS7P62081 194 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 CDK5Q00535 292 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 ROM1Q03395 351 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 DYNC1I2Q13409 638 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 APOFQ13790 326 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 TMEM236Q5W0B7 351 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 C10orf99Q6UWK7 81 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 NUFIP1Q9UHK0 495 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 PITPNC1Q9UKF7 332 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 SLC22A13Q9Y226 551 aa12.23□□□□□ -0.45
TRAPPC9-213ENST00000522504 A0A1B0GTI1 187 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 TMEM82A0PJX8 343 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 F2RL2O00254 374 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 CD24P25063 80 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 FAM98BQ52LJ0 330 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 CLVS2Q5SYC1 327 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 DHFR2Q86XF0 187 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 ZNF679Q8IYX0 411 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 ASCC1Q8N9N2 400 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 MROQ9BYG7 248 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 INPP5EQ9NRR6 644 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 POLDIP2Q9Y2S7 368 aa12.22□□□□□ -0.45
TRAPPC9-213ENST00000522504 RYR2Q92736 4967 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 MMP23AO75900 390 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 RBP4P02753 201 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 HMGN1P05114 100 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 PF4V1P10720 104 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 EDDM3BP56851 147 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 OR12D2P58182 307 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ACTA2P62736 377 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ACTG2P63267 376 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ACTC1P68032 377 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ACTA1P68133 377 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 KCTD18Q6PI47 426 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 PLEKHG7Q6ZR37 379 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 OR14K1Q8NGZ2 314 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 MYDGFQ969H8 173 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 ITFG2Q969R8 447 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 APOL4Q9BPW4 351 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 CHID1Q9BWS9 393 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 NDE1Q9NXR1 346 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 MTCH1Q9NZJ7 389 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 V9GYS6 101 aa12.21□□□□□ -0.45
TRAPPC9-213ENST00000522504 DYNC2H1Q8NCM8 4307 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-213ENST00000522504 SACSQ9NZJ4 4579 aa12.2□□□□□ -0.46
TRAPPC9-213ENST00000522504 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
TRAPPC9-213ENST00000522504 IGHV2-26A0A0B4J1V2 119 aa12.2□□□□□ -0.46
TRAPPC9-213ENST00000522504 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
TRAPPC9-213ENST00000522504 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms