RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SRP9P49458 86 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MMP15P51511 669 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MAP2K6P52564 334 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CARD18P57730 90 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 HGFACQ04756 655 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 PLA2G7Q13093 441 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CAMK2DQ13557 499 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 RNPS1Q15287 305 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 DEFB112Q30KQ8 113 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 TMEM176BQ3YBM2 270 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 TBRG1Q3YBR2 411 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 ATAD3CQ5T2N8 411 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 HACD4Q5VWC8 232 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 OR7E24Q6IFN5 339 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 KCTD18Q6PI47 426 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 DNM1P34Q6PK57 102 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CORO6Q6QEF8 472 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 PLET1Q6UQ28 207 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 BAIAP2L2Q6UXY1 529 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 DCXRQ7Z4W1 244 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 SERPINA12Q8IW75 414 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 UEVLDQ8IX04 471 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 ADPRHL1Q8NDY3 354 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 ST7LQ8TDW4 575 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MCHR2Q969V1 340 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 OXGR1Q96P68 337 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MARVELD1Q9BSK0 173 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MRPL13Q9BYD1 178 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MS4A7Q9GZW8 240 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 KLHL9Q9P2J3 617 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 FBXL3Q9UKT7 428 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 FOXJ3Q9UPW0 622 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 LRP12Q9Y561 859 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 N6AMT1Q9Y5N5 214 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CACNG2Q9Y698 323 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 R4GMQ9 66 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 A0A087WZY1 265 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV3-15A0A0B4J1V0 119 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV1-18A0A0C4DH31 117 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 CIB4A0PJX0 185 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 INMT-MINDY4F8WBC2 141 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 ITGA5P08648 1049 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 LYL1P12980 280 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 LAP3P28838 519 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC6A1P30531 599 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 CALCRP30988 508 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 THBS4P35443 961 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 EIF1P41567 113 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 BTG1P62324 171 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 RAC1P63000 192 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 LCN2P80188 198 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 PITPNAQ00169 270 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 GLO1Q04760 184 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 KLF9Q13886 244 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 AVPI1Q5T686 147 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 CARD17Q5XLA6 110 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 C3orf33Q6P1S2 294 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 Q6ZSV7 163 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 TMPPEQ6ZT21 453 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 GLB1L2Q8IW92 636 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 GTPBP8Q8N3Z3 284 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 OR10S1Q8NGN2 331 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 SYNPRQ8TBG9 265 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 TSEN15Q8WW01 171 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 RDH5Q92781 318 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 TMEM106AQ96A25 262 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 UPRTQ96BW1 309 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 DMRTB1Q96MA1 342 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 RBP7Q96R05 134 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 ABCG5Q9H222 651 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 AUNIPQ9H7T9 357 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 PTGES2Q9H7Z7 377 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 SEC61A2Q9H9S3 476 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 LIN7BQ9HAP6 207 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 PLEKHA1Q9HB21 404 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 NEK6Q9HC98 313 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 EMC7Q9NPA0 242 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC17A5Q9NRA2 495 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 CENPMQ9NSP4 180 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF221Q9UK13 617 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 OR52A1Q9UKL2 312 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 GTF2A1LQ9UNN4 478 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 HDGFL3Q9Y3E1 203 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 KMT2AQ03164 3969 aa6.09□□□□□ -1.43
CTNNA1-227ENST00000521387 LOC102725191A0A1B0GVB3 256 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 A0A1W2PPL8 197 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 AQP7P3A6NL99 342 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 ANXA2P2A6NMY6 339 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 TRAPPC2LH3BP13 241 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 SULT2B1O00204 365 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 SULT1B1O43704 296 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 ORC5O43913 435 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 TMEM127O75204 238 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 PMS2P2O95744 297 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 PLATP00750 562 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 MT-ND4P03905 459 aa6.08□□□□□ -1.44
CTNNA1-227ENST00000521387 ANXA2P07355 339 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms