RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 VGLL3A8MV65 326 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 H0YHG0 523 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 SYNGR1O43759 233 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 CHST1O43916 411 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 GYPAP02724 150 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 VPREB1P12018 145 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 BGNP21810 368 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 PPIBP23284 216 aaKnown RBP4.87□□□□□ -1.63
CCDC6-203ENST00000518638 AZGP1P25311 298 aaKnown RBP4.87□□□□□ -1.63
CCDC6-203ENST00000518638 CASQ1P31415 396 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 PMELP40967 661 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 THBS3P49746 956 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 RAP1BP61224 184 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 RAP1AP62834 184 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 FMODQ06828 376 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 MAB21L1Q13394 359 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 ENDOGQ14249 297 aaKnown RBP4.87□□□□□ -1.63
CCDC6-203ENST00000518638 RGNQ15493 299 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 OR8G1Q15617 311 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 PNLIPRP3Q17RR3 467 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 ANKDD1AQ495B1 522 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 AARDQ4LEZ3 155 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 FAM98BQ52LJ0 330 aaKnown RBP4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TCTEX1D4Q5JR98 221 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TEX36Q5VZQ5 186 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 REEP3Q6NUK4 255 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 C1orf94Q6P1W5 598 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TEX45Q8NA69 505 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 UXS1Q8NBZ7 420 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 C19orf18Q8NEA5 215 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TNFRSF14Q92956 283 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 ITCHQ96J02 903 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 AKR1E2Q96JD6 320 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 MCHR1Q99705 422 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 ZNF426Q9BUY5 554 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 HDHD2Q9H0R4 259 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TXNIPQ9H3M7 391 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 WDR55Q9H6Y2 383 aaPredicted RBP4.87□□□□□ -1.63
CCDC6-203ENST00000518638 POLE4Q9NR33 117 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 INPP5EQ9NRR6 644 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 PTTG3PQ9NZH4 202 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 SLC17A7Q9P2U7 560 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 TCF19Q9Y242 345 aa4.87□□□□□ -1.63
CCDC6-203ENST00000518638 IGHV3-64DA0A0J9YX35 117 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 A0A1W2PRD5 423 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 A0A1W2PRF3 423 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 A0A1W2PRM7 423 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RBMY1BA6NDE4 496 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RBMY1EA6NEQ0 496 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 NKX6-3A6NJ46 265 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 KPNA4O00629 521 aaPredicted RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 VCYO14598 125 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 C1QCP02747 245 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 MT-ND1P03886 318 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 HLA-DPB1P04440 258 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 SERPINE1P05121 402 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 CCDC159P0C7I6 412 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RBMY1DP0C7P1 496 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RBM34P42696 430 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ERFP50548 548 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 NANOS2P60321 138 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RPL27P61353 136 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 LSM6P62312 80 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 CDK6Q00534 326 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 KLRD1Q13241 179 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 MPPED2Q15777 294 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 GCNT6Q5T4J0 391 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 PRAMEF6Q5VXH4 476 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ETFRF1Q6IPR1 90 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 TMEM182Q6ZP80 229 aaPredicted RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 C16orf82Q7Z2V1 217 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 PARP16Q8N5Y8 322 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 Q8N7P7 452 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 OR1F12Q8NHA8 337 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 LRRC8CQ8TDW0 803 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ADAMTS16Q8TE57 1224 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 AENQ8WTP8 325 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 SPRYD4Q8WW59 207 aaPredicted RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 H1FXQ92522 213 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ST6GALNAC6Q969X2 333 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 LYZL4Q96KX0 146 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 COQ7Q99807 217 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 ADAT1Q9BUB4 502 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 NDEL1Q9GZM8 345 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 HEXA-AS1Q9H8Q6 139 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RNPEPL1Q9HAU8 725 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 AIG1Q9NVV5 245 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 SLC7A7Q9UM01 511 aa4.86□□□□□ -1.63
CCDC6-203ENST00000518638 RRP15Q9Y3B9 282 aaKnown RBP4.86□□□□□ -1.63
CCDC6-203ENST00000518638 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 IGKV1D-43A0A0B4J1Z2 117 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 PRR23D1E9PI22 279 aaPredicted RBP4.85□□□□□ -1.63
CCDC6-203ENST00000518638 HDAC3O15379 428 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 SELENOFO60613 162 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 OR7A10O76100 309 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 TSPAN19P0C672 248 aa4.85□□□□□ -1.63
CCDC6-203ENST00000518638 PRR23D2P0DMB1 279 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms