RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 DNAJC12Q9UKB3 198 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IKZF2Q9UKS7 526 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RPL26L1Q9UNX3 145 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF337Q9Y3M9 751 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CHTOPQ9Y3Y2 248 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CACNG2Q9Y698 323 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IGLV7-46A0A075B6I9 117 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 IGHV3-16A0A0C4DH30 117 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TCRBV9S1A1TA0A576 114 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TRDCB7Z8K6 153 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 C9JVG2 144 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SOCS3O14543 225 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CHST1O43916 411 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CXCL13O43927 109 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SH3BGRLO75368 114 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 OR2J3O76001 311 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 H6PDO95479 791 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SLC2A10O95528 541 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TMEM50AO95807 157 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 PAHP00439 452 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 KRT6AP02538 564 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 IFNA4P05014 189 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SERPIND1P05546 499 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CD55P08174 381 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF14P17017 642 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 HTR1FP30939 366 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MAP3K8P41279 467 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ALDH3B2P48448 385 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 GSSP48637 474 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 PRLHRP49683 370 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 DAP3P51398 398 aaKnown RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CARD18P57730 90 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ERVK11-1P61568 191 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MERTKQ12866 999 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 IL18Q14116 193 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MAD2L1BPQ15013 274 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 DUSP7Q16829 419 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 KLHL38Q2WGJ6 581 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 HIKESHIQ53FT3 197 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 C1orf220Q5T0J3 134 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 OR2G6Q5TZ20 316 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 RAET1LQ5VY80 246 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 UFSP1Q6NVU6 142 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 PGAP1Q75T13 922 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 UTS2BQ765I0 119 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 LRRTM1Q86UE6 522 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ERI1Q8IV48 349 aaKnown RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MTURNQ8N3F0 131 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SPICQ8N5J4 248 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 WDSUB1Q8N9V3 476 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 WDR31Q8NA23 367 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 OR6T1Q8NGN1 323 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 OR2A1Q8NGT9 310 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SLC7A13Q8TCU3 470 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ABHD3Q8WU67 409 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TOMM40LQ969M1 308 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ARL5BQ96KC2 179 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF599Q96NL3 588 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MAPKAP1Q9BPZ7 522 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 SLC35A5Q9BS91 424 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CHCHD5Q9BSY4 110 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TMED9Q9BVK6 235 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CDCA4Q9BXL8 241 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 RBKSQ9H477 322 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 NANOGQ9H9S0 305 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 CAB39LQ9H9S4 337 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MRPS30Q9NP92 439 aaKnown RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 NT5MQ9NPB1 228 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 IL26Q9NPH9 171 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 MIEF1Q9NQG6 463 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 EXOSC3Q9NQT5 275 aaKnown RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 EHFQ9NZC4 300 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 WARS2Q9UGM6 360 aaKnown RBP2.34□□□□□ -2.03
CPNE3-204ENST00000517862 KCNIP3Q9Y2W7 256 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 STARD10Q9Y365 291 aa2.34□□□□□ -2.03
CPNE3-204ENST00000517862 TRAV9-2A0A087WT02 112 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 A0A087WYN8 130 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 IGHV1-18A0A0C4DH31 117 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 LOC100131303A0A0U1RQF7 123 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 IQANK1A0A1B0GTG1 560 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 SMCO3A2RU48 225 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF705EA8MWA4 302 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 E9PLD3 99 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 GOLGA8TH3BQL2 631 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 SULT2B1O00204 365 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PSTPIP1O43586 416 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ICOSLGO75144 302 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF253O75346 499 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 GPX5O75715 221 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 GNA14O95837 355 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 IGHG4P01861 327 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ALDOBP05062 364 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 KITLGP21583 273 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 CASQ1P31415 396 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 CFHR2P36980 270 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PKNOX1P55347 436 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 BIDP55957 195 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 SNRPFP62306 86 aaKnown RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 LIPEQ05469 1076 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms