RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LRRC18Q8N456 261 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 C17orf78Q8N4C9 275 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SLC22A24Q8N4F4 322 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CLDN22Q8N7P3 220 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ARIH2OSQ8N7S6 290 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 THAP8Q8NA92 274 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PAPD5Q8NDF8 572 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 NOXO1Q8NFA2 376 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PROKR2Q8NFJ6 384 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR52E2Q8NGJ4 325 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR51G2Q8NGK0 314 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR13C3Q8NGS6 347 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR13C9Q8NGT0 318 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR4K13Q8NH42 304 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR5K1Q8NHB7 308 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MAGEE2Q8TD90 523 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 SSMEM1Q8WWF3 244 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CAPSLQ8WWF8 208 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TMEM54Q969K7 222 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RNF183Q96D59 192 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 LGALS12Q96DT0 336 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FOXN4Q96NZ1 517 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 NIPSNAP1Q9BPW8 284 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MCRIP2Q9BUT9 160 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 FUNDC2Q9BWH2 189 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TSSK6Q9BXA6 273 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR52D1Q9H346 318 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 NARFLQ9H6Q4 476 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CCNB1IP1Q9NPC3 277 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 UFSP2Q9NUQ7 469 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ACOXLQ9NUZ1 547 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 POU2F3Q9UKI9 436 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 AMDHD2Q9Y303 409 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CDH10Q9Y6N8 788 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HIVEP3Q5T1R4 2406 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CRYBG3Q68DQ2 2970 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PCNX3Q9H6A9 2034 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GTF3C1Q12789 2109 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DIDO1Q9BTC0 2240 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 LOC105371242A0A075B767 164 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 NBPF19A0A087WUL8 3843 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 A0A1B0GW15 77 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SLC22A23A1A5C7 686 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PRSS37A4D1T9 235 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DPRXA6NFQ7 191 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TMEM210A6NLX4 147 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RIIAD1A6NNX1 92 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DEFB108AA8MXU0 73 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 E9PQ18 207 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ITGB1BP1O14713 200 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 IMPA2O14732 288 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 IDH3BO43837 385 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PLAUP00749 431 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 IGHMP01871 453 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GAPDHP04406 335 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 TSPAN19P0C672 248 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RD3LP0DJH9 198 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HIST1H1CP16403 213 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 NPR2P20594 1047 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PCSK6P29122 969 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CDKN2AP42771 156 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 PCYT1AP49585 367 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MMP15P51511 669 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FXYD6P3P58550 94 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PAX5Q02548 391 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 KRR1Q13601 381 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 GINS1Q14691 196 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HIST3H3Q16695 136 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GSG1Q2KHT4 349 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MESTQ5EB52 335 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RNASE12Q5GAN4 147 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 RPL13AP3Q6NVV1 102 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ADAM5Q6NVV9 412 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DNM1P34Q6PK57 102 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZNF620Q6ZNG0 422 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RASSF6Q6ZTQ3 369 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 Q6ZWC4 215 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SSX8Q7RTT4 187 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DCXRQ7Z4W1 244 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MDP1Q86V88 176 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CDC20BQ86Y33 519 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SKA3Q8IX90 412 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PAQR4Q8N4S7 273 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 IQCF1Q8N6M8 205 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 WDR31Q8NA23 367 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 LRRC75AQ8NAA5 344 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ACBD4Q8NC06 268 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TMEM104Q8NE00 496 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR2T33Q8NG76 320 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR52N4Q8NGI2 321 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR1L6Q8NGR2 347 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZNF519Q8TB69 540 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TEX47Q8TBZ9 253 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FNDC8Q8TC99 324 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PHF21AQ96BD5 680 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZNF503Q96F45 646 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PELI1Q96FA3 418 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DUS3LQ96G46 650 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms