RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 APLFQ8IW19 511 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 LRRC25Q8N386 305 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM161BQ8NDZ6 487 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR4P4Q8NGL7 312 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR2G3Q8NGZ4 309 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR1S1Q8NH92 325 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 MFSD8Q8NHS3 518 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 LMO3Q8TAP4 145 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 EEF1AKMT1Q8WVE0 214 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM159Q96B96 161 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 MYO15BQ96JP2 1530 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 BTF3L4Q96K17 158 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CEP170P1Q96L14 293 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR2V2Q96R30 315 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CMSS1Q9BQ75 279 aaKnown RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CHCHD5Q9BSY4 110 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 DDA1Q9BW61 102 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR51E2Q9H255 320 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 C6orf106Q9H6K1 298 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF430Q9H8G1 570 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 SMPXQ9UHP9 88 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 DKKL1Q9UK85 242 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ERGIC3Q9Y282 383 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 FAM32AQ9Y421 112 aaKnown RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 IGHV7-81A0A0B4J1V7 117 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TRAV8-2A0A0B4J237 113 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 IGHV3OR16-9A0A0B4J2B5 98 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 A8MXK9 166 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF878C9JN71 531 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF780AO75290 641 aaPredicted RBP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SPAG7O75391 227 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SUPT3HO75486 399 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR2B3O76000 313 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ALPLP05186 524 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 GUSBP08236 651 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 GIPP09681 153 aaPredicted RBP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 PGAM2P15259 253 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 CD36P16671 472 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 RAB3AP20336 220 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 COX7A1P24310 79 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 MPIP34949 423 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 CDKN2AP42771 156 aaKnown RBP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 LGALS7P47929 136 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 REG1BP48304 166 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 PSMB2P49721 201 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 NCBP2P52298 156 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 PFN3P60673 137 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SLC35A2P78381 396 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TFAMQ00059 246 aaKnown RBP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 IFITM2Q01629 132 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 COL10A1Q03692 680 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 CD47Q08722 323 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM255AQ5JRV8 349 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 FBXW9Q5XUX1 488 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM215Q68D42 235 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SPNS3Q6ZMD2 512 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF589Q86UQ0 364 aaPredicted RBP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM61Q8N0U2 210 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF485Q8NCK3 441 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR2Z1Q8NG97 314 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR1L8Q8NGR8 309 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR1P1Q8NH06 330 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SPPL2BQ8TCT7 592 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 NPRL2Q8WTW4 380 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 Q8WTZ3 238 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 YIPF5Q969M3 257 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 MARC2Q969Z3 335 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SFRP2Q96HF1 295 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SMIM8Q96KF7 97 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 BIRC8Q96P09 236 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 QKIQ96PU8 341 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM204Q9BSN7 226 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SUCNR1Q9BXA5 334 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR11A1Q9GZK7 315 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 TXNIPQ9H3M7 391 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 VSIRQ9H7M9 311 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ENY2Q9NPA8 101 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ARMC1Q9NVT9 282 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 CMTM6Q9NX76 183 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF226Q9NYT6 803 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 GINS2Q9Y248 185 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 PRELID3BQ9Y3B1 194 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 SLC22A7Q9Y694 548 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 COX11Q9Y6N1 276 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 LRRK1Q38SD2 2015 aa3.05□□□□□ -1.92
RNU4-60P-201ENST00000517239 THSD7BQ9C0I4 1608 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 NCOA1Q15788 1441 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 A0A0J9YXV3 536 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 A0A0U1RQV1 116 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 TRIM49D1C9J1S8 452 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 NOS1APO75052 506 aaPredicted RBP3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 DUSP14O95147 198 aaKnown RBP3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 HAND1O96004 215 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 FABP3P05413 133 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 REG1AP05451 166 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 GTF2F2P13984 249 aa3.04□□□□□ -1.92
RNU4-60P-201ENST00000517239 CXCL3P19876 107 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms