RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 DYNC1I2Q13409 638 aaKnown RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 DGCR6Q14129 220 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 RFX4Q33E94 735 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CCDC14Q49A88 953 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 FAM78AQ5JUQ0 283 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 N4BP2L1Q5TBK1 243 aaPredicted RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 RESP18Q5W5W9 173 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PTRHD1Q6GMV3 140 aaKnown RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PLEKHG7Q6ZR37 379 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 RAB43Q86YS6 212 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PLCZ1Q86YW0 608 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CRLF3Q8IUI8 442 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 ARRDC1Q8N5I2 433 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 C14orf178Q8N769 122 aaPredicted RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 OR51G1Q8NGK1 321 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 OR2Y1Q8NGV0 311 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 OR2L8Q8NGY9 312 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 SPPL2BQ8TCT7 592 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CREB3L1Q96BA8 519 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 ZNF514Q96K75 400 aaPredicted RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 TEAD3Q99594 435 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 OSBPL11Q9BXB4 747 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CHRNA10Q9GZZ6 450 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 LINC00597Q9H2U6 94 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 OR51B5Q9H339 312 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 METTL8Q9H825 291 aaKnown RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 TREX1Q9NSU2 369 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 IL17CQ9P0M4 197 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 AP3M1Q9Y2T2 418 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 HES2Q9Y543 173 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CEP290O15078 2479 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PLXNA1Q9UIW2 1896 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PRRC2BQ5JSZ5 2229 aaKnown RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 A0A0A6YYH2 397 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 A6NJ64 397 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 B4GALT5O43286 388 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 SGCEO43556 437 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 CTNSO60931 367 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UPK1BO75841 260 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 MMP23AO75900 390 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PTHP01270 115 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 BGLAPP02818 100 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TEAD1P28347 426 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 CEACAM3P40198 252 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 RGS6P49758 472 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UBE2E1P51965 193 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 EMP2P54851 167 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ARPP19P56211 112 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 WNT4P56705 351 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UBE2G2P60604 165 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PRPS1P60891 318 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UBE2KP61086 200 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PPP1CBP62140 327 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 IFFO1Q0D2I5 559 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PIGHQ14442 188 aaPredicted RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 KIR2DS1Q14954 304 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 PON3Q15166 354 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 POU2AF1Q16633 256 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZSCAN26Q16670 478 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 BSXQ3C1V8 233 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TTLL9Q3SXZ7 439 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 GCSAMLQ5JQS6 135 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 RBM48Q5RL73 367 aaKnown RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 OR2T5Q6IEZ7 315 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ALKAL1Q6UXT8 129 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZNF493Q6ZR52 646 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 AHSA2Q719I0 299 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 STRADAQ7RTN6 431 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 MRPL52Q86TS9 123 aaKnown RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 SETD3Q86TU7 594 aaPredicted RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 LRRC6Q86X45 466 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TMEM25Q86YD3 366 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZFP41Q8N8Y5 198 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 CCDC54Q8NEL0 328 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TSTD1Q8NFU3 115 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 OR2T29Q8NH02 315 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZFAND1Q8TCF1 268 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 IFT81Q8WYA0 676 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 RGP1Q92546 391 aaPredicted RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 IL22RA2Q969J5 263 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 NTAN1Q96AB6 310 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TMEM101Q96IK0 257 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UBE2E2Q96LR5 201 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 MAGEB18Q96M61 343 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZNF75AQ96N20 296 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 UQCC2Q9BRT2 126 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 SLC38A1Q9H2H9 487 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 SAV1Q9H4B6 383 aaPredicted RBP2.16□□□□□ -2.06
HERC4-215ENST00000515753 PRORYQ9H606 182 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ASB7Q9H672 318 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 MED4Q9NPJ6 270 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 XPNPEP1Q9NQW7 623 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 FAM49BQ9NUQ9 324 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 CYB5R1Q9UHQ9 305 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 SLC7A11Q9UPY5 501 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 ZNF257Q9Y2Q1 563 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 TTC28Q96AY4 2481 aa2.16□□□□□ -2.06
HERC4-215ENST00000515753 CUL9Q8IWT3 2517 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 TRAV19A0A0A6YYK7 116 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms