RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, human

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-243	ENST00000515160	RCAN2	Q14206	197 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	SYCP1	Q15431	976 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	HIGD2B	Q4VC39	106 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	MARC1	Q5VT66	337 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PDPK2P	Q6A1A2	396 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	SPINK14	Q6IE38	97 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	MBOAT1	Q6ZNC8	495 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	NDUFAF7	Q7L592	441 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PEX26	Q7Z412	305 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF677	Q86XU0	584 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZBED8	Q8IZ13	594 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	KIR2DL5A	Q8N109	375 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	NKAPP1	Q8N9T2	125 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	GATS	Q8NAP1	163 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	KIR2DL5B	Q8NHK3	375 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	TMEM54	Q969K7	222 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PAXX	Q9BUH6	204 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	SNRNP25	Q9BV90	132 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PLA2G12A	Q9BZM1	189 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZDHHC11	Q9H8X9	412 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF702P	Q9H963	129 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PLGRKT	Q9HBL7	147 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	STMN3	Q9NZ72	180 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	CD274	Q9NZQ7	290 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	MDFIC	Q9P1T7	246 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZMAT5	Q9UDW3	170 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	YARS2	Q9Y2Z4	477 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	DYSF	O75923	2080 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	ARHGAP21	Q5T5U3	1957 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	PRSS37	A4D1T9	235 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	SIGLEC16	A6NMB1	481 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160		F6UB75	175 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	IGHV3-23	P01764	117 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	PIRT	P0C851	137 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	UGT2B7	P16662	529 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	CD9	P21926	228 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	CFHR2	P36980	270 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	HCAR3	P49019	387 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	RPL26	P61254	145 aa	Known RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160	XRCC4	Q13426	336 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	ARFRP1	Q13795	201 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	TRMT5	Q32P41	509 aa	Known RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160	C14orf177	Q52M58	125 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	C6orf183	Q5T699	404 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	RNLS	Q5VYX0	342 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	TMEM205	Q6UW68	189 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	TRAPPC5	Q8IUR0	188 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	IQCF2	Q8IXL9	164 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	KLHL30-AS1	Q8NEE0	82 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	RHOXF1	Q8NHV9	184 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	NUBPL	Q8TB37	319 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	NDNF	Q8TB73	568 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	ASZ1	Q8WWH4	475 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	ISOC2	Q96AB3	205 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	PIK3IP1	Q96FE7	263 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	DNAJC1	Q96KC8	554 aa	Known RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160	C1orf147	Q96MC9	270 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160	NICN1	Q9BSH3	213 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	OSBPL10	Q9BXB5	764 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	OR51J1	Q9H342	316 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	EURL	Q9NYK6	297 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	C3orf18	Q9UK00	162 aa		4.18	□□□□□ -1.74
CAST-243	ENST00000515160	RPL26L1	Q9UNX3	145 aa	Known RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160	RCL1	Q9Y2P8	373 aa	Known RBP	4.18	□□□□□ -1.74
CAST-243	ENST00000515160		A0A1B0GW55	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	MGAT4D	A6NG13	374 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	CENPX	A8MT69	81 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	SRRM5	B3KS81	715 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	XRCC2	O43543	280 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	HBE1	P02100	147 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	HLA-DQB2	P05538	268 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L2	P0CJ85	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L3	P0CJ86	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L4	P0CJ87	422 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L5	P0CJ88	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L6	P0CJ89	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L7	P0CJ90	424 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	CCNO	P22674	350 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	TAS2R19	P59542	299 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF45	Q02386	682 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	SLC25A11	Q02978	314 aa	Known RBP	4.17	□□□□□ -1.74
CAST-243	ENST00000515160	CLINT1	Q14677	625 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	RPEL1	Q2QD12	228 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	TFDP3	Q5H9I0	405 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	CEP85L	Q5SZL2	805 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	ATAD3C	Q5T2N8	411 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-243	ENST00000515160	ASCL4	Q6XD76	172 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	CRLF3	Q8IUI8	442 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	PRSS58	Q8IYP2	241 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	OR10R2	Q8NGX6	335 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	OR2L2	Q8NH16	312 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	FAM222B	Q8WU58	562 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	LCN9	Q8WX39	176 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	SH3GL3	Q99963	347 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	OR52A5	Q9H2C5	316 aa		4.17	□□□□□ -1.74
CAST-243	ENST00000515160	SRMS	Q9H3Y6	488 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms