RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ASXL3Q9C0F0 2248 aa8.5□□□□□ -1.05
VCAN-210ENST00000513960 ABCA7Q8IZY2 2146 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 ZFP92A6NM28 416 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 RAD51DO75771 328 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 ONECUT2O95948 504 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 CDAP32320 146 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PIGPP57054 158 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 TAS2R46P59540 309 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 BATFQ16520 125 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 ZNF385CQ66K41 422 aaPredicted RBP8.49□□□□□ -1.05
VCAN-210ENST00000513960 FAM166AQ6J272 317 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 UNQ6494/PRO21346Q6UXR6 183 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 CARFQ8N187 725 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PGAM5Q96HS1 289 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 LRFN1Q9P244 771 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 HSF4Q9ULV5 492 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PCDH15Q96QU1 1955 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 SEC14L6B5MCN3 397 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 IGHV2-5P01817 119 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 HOXA5P20719 270 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PTGER4P35408 488 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 BIDP55957 195 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 RPL23AP62750 156 aaKnown RBP8.49□□□□□ -1.05
VCAN-210ENST00000513960 DLK1P80370 383 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
VCAN-210ENST00000513960 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 LANCL3Q6ZV70 420 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 D2HGDHQ8N465 521 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 EMG1Q92979 244 aaKnown RBP8.49□□□□□ -1.05
VCAN-210ENST00000513960 PACRGQ96M98 296 aaPredicted RBP8.49□□□□□ -1.05
VCAN-210ENST00000513960 LPAR5Q9H1C0 372 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PCED1AQ9H1Q7 454 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PADI1Q9ULC6 663 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 COL4A2P08572 1712 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 ADAM10O14672 748 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 CDC14BO60729 498 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 TBPP20226 339 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 CLRN1P58418 232 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 PLAC9Q5JTB6 97 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 C6orf201Q7Z4U5 140 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 C20orf196Q8IYI0 205 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 POMT1Q9Y6A1 747 aa8.49□□□□□ -1.05
VCAN-210ENST00000513960 IGHV3-20A0A0C4DH32 117 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 FAM24AA6NFZ4 105 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 CCDC85CA6NKD9 419 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 PHF1O43189 567 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 CST7O76096 145 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 FCGR2AP12318 317 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 MYF5P13349 255 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 GLB1P16278 677 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 OR5B2Q96R09 309 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 OR5H15A6NDH6 313 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 OR5H1A6NKK0 313 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 E5RGE8 158 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SLC31A2O15432 143 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 IDH3GP51553 393 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 RRADP55042 308 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 C1orf100Q5SVJ3 147 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 LYZL2Q7Z4W2 148 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 C11orf40Q8WZ69 217 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 LIN37Q96GY3 246 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 RTBDNQ9BSG5 229 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 ZNF107Q9UII5 783 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 NSG2Q9Y328 171 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 FAM230AA0A1W2PPH8 454 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 H3BMH7 237 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 PLPP3O14495 311 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 MMP7P09237 267 aaPredicted RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 CXCL1P09341 107 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SLC26A5P58743 744 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 STARD6P59095 220 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 HGFACQ04756 655 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SMAD4Q13485 552 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 PDCD1Q15116 288 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 TDHQ8IZJ6 230 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 C8orf44Q96CB5 159 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 G6PC2Q9NQR9 355 aa8.48□□□□□ -1.05
VCAN-210ENST00000513960 SPTBN5Q9NRC6 3674 aaKnown RBP8.48□□□□□ -1.05
VCAN-210ENST00000513960 TRBV6-7A0A0A0MS04 114 aa8.47□□□□□ -1.05
VCAN-210ENST00000513960 HSPA12AO43301 675 aa8.47□□□□□ -1.05
VCAN-210ENST00000513960 TTRP02766 147 aa8.47□□□□□ -1.05
VCAN-210ENST00000513960 GSTP1P09211 210 aaKnown RBP8.47□□□□□ -1.05
VCAN-210ENST00000513960 IGFBP3P17936 291 aaPredicted RBP8.47□□□□□ -1.05
VCAN-210ENST00000513960 FSTP19883 344 aa8.47□□□□□ -1.05
VCAN-210ENST00000513960 RNF4P78317 190 aa8.47□□□□□ -1.05
VCAN-210ENST00000513960 RSPO4Q2I0M5 234 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms