RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	RNF223	E7ERA6	249 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	SELL	P14151	372 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	GAL	P22466	123 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	MAPK3	P27361	379 aa	Predicted RBP	12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	GPR6	P46095	362 aa	Predicted RBP	12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	PPP3R1	P63098	170 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	IL24	Q13007	206 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	CTF1	Q16619	201 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	KRTAP21-3	Q3LHN1	58 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	FAM166A	Q6J272	317 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	CLEC2A	Q6UVW9	174 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	ASCL4	Q6XD76	172 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF573	Q86YE8	665 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	OR10Z1	Q8NGY1	313 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	PHYHIP	Q92561	330 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	ERGIC1	Q969X5	290 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	TECTB	Q96PL2	329 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	TMEM246	Q9BRR3	403 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	VCX3A	Q9NNX9	186 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	CTSZ	Q9UBR2	303 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	SSR3	Q9UNL2	185 aa		12.17	□□□□□ -0.46
MATR3-238	ENST00000512107	TRAV1-2	A0A0B4J238	106 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	CLDN25	C9JDP6	229 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	AIRE	O43918	545 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	NOS1AP	O75052	506 aa	Predicted RBP	12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	GYPA	P02724	150 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	SDC2	P34741	201 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF93	P35789	620 aa	Predicted RBP	12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	RPL5	P46777	297 aa	Known RBP	12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	CLDN12	P56749	244 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	TMEM33	P57088	247 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	SEC61A1	P61619	476 aa	Known RBP	12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	LMO4	P61968	165 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	BTG1	P62324	171 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	MZT1	Q08AG7	82 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	PDCD1	Q15116	288 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	SHE	Q5VZ18	495 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	TEX36	Q5VZQ5	186 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	ACP7	Q6ZNF0	438 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	RTN4RL2	Q86UN3	420 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	LRRC28	Q86X40	367 aa	Predicted RBP	12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	ANKRD13B	Q86YJ7	626 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	OR11L1	Q8NGX0	322 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	CLDND2	Q8NHS1	167 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	TNFAIP8L1	Q8WVP5	186 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	TCF7L1	Q9HCS4	588 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF222	Q9UK12	451 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	F8	P00451	2351 aa		12.16	□□□□□ -0.46
MATR3-238	ENST00000512107	IGKV1D-17	A0A075B6S4	117 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PPIAL4E	A0A075B759	164 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PPIAL4D	F5H284	164 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	LGALS8	O00214	317 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	KDM4B	O94953	1096 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PPIAL4F	P0DN26	164 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	TMEM225B	P0DP42	221 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	SLC2A2	P11168	524 aa	Predicted RBP	12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	DUSP1	P28562	367 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PTGFR	P43088	359 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	SNU13	P55769	128 aa	Known RBP	12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	VBP1	P61758	197 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	P2RY14	Q15391	338 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	ZNF404	Q494X3	552 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	C1orf100	Q5SVJ3	147 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	HES5	Q5TA89	166 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	OR10K2	Q6IF99	312 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	GPR141	Q7Z602	305 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	BIVM	Q86UB2	503 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	JAGN1	Q8N5M9	183 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	CD177	Q8N6Q3	437 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	OR51F2	Q8NH61	342 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PIMREG	Q9BSJ6	248 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	CKLF	Q9UBR5	152 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	ING4	Q9UNL4	249 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	PPIAL4A	Q9Y536	164 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	CEPT1	Q9Y6K0	416 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	ARHGAP32	A7KAX9	2087 aa		12.15	□□□□□ -0.46
MATR3-238	ENST00000512107	OOEP	A6NGQ2	149 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	CEACAM18	A8MTB9	384 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	FAM157A	C9JC47	383 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107		H7C1Q1	480 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	ARL6IP5	O75915	188 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	GABARAP	O95166	117 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	ACAA1	P09110	424 aa	Predicted RBP	12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	PSG2	P11465	335 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	GLRA1	P23415	457 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	RPS19	P39019	145 aa	Known RBP	12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	QRFP	P83859	136 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	MXD1	Q05195	221 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	STUM	Q69YW2	141 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	GLIPR1L1	Q6UWM5	242 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	TMEM104	Q8NE00	496 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	ANGPTL6	Q8NI99	470 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	ZNF671	Q8TAW3	534 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	CEP19	Q96LK0	163 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	GPER1	Q99527	375 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	CCL13	Q99616	98 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	REG4	Q9BYZ8	158 aa		12.14	□□□□□ -0.47
MATR3-238	ENST00000512107	FAM192A	Q9GZU8	254 aa		12.14	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms