RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 GLYATL1P3A0A0U1RQE8 302 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 C21orf140B9A014 251 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 F5H768 121 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 H7C0C1 242 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 K7EN84 100 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 CCRL2O00421 344 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 FGF16O43320 207 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 KLRC4O43908 158 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 EFNA2O43921 213 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TRAPPC6AO75865 159 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 GATBO75879 557 aaKnown RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 AQP8O94778 261 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SNAP29O95721 258 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 RAB36O95755 333 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 IFNA21P01568 189 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 APOC1P02654 83 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 C2P06681 752 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TFPTP0C1Z6 253 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SCGB1A1P11684 91 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 GTF2F2P13984 249 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 KCNE1P15382 129 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 NTSP30990 170 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 MPIP34949 423 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SRP9P49458 86 aaKnown RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 ACOT2P49753 483 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 ERFP50548 548 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 FGF8P55075 233 aaPredicted RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 RAB31Q13636 194 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SF3A2Q15428 464 aaKnown RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 GABRA6Q16445 453 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 CYBRD1Q53TN4 286 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SAXO2Q658L1 398 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 ACSM5Q6NUN0 579 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TMEM179BQ7Z7N9 219 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 DHFR2Q86XF0 187 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 BBS7Q8IWZ6 715 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 LGI3Q8N145 548 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 MTURNQ8N3F0 131 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 MS4A15Q8N5U1 240 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TPRX1Q8N7U7 411 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SMIM19Q96E16 107 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 FAM210BQ96KR6 192 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 RILPQ96NA2 401 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 OLFM3Q96PB7 478 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TSC22D3Q99576 134 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 ARL6Q9H0F7 186 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 NANOGQ9H9S0 305 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 FGF20Q9NP95 211 aaPredicted RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 ZDHHC4Q9NPG8 344 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 ISYNA1Q9NPH2 558 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 DUS2Q9NX74 493 aaKnown RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 GALPQ9UBC7 116 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 ZNF391Q9UJN7 358 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 NDRG2Q9UN36 371 aaKnown RBP2.85□□□□□ -1.95
NUP54-209ENST00000510569 SCML2Q9UQR0 700 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 NUBP2Q9Y5Y2 271 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 CACNA1SQ13698 1873 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 SCN7AQ01118 1682 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 TSPAN11A1L157 253 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 LRIT2A6NDA9 550 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 TVP23AA6NH52 213 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ZNF98A6NK75 572 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SEC14L6B5MCN3 397 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 J3QLI3 93 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 PSMD12O00232 456 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 CXCR6O00574 342 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SLC31A2O15432 143 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CRXO43186 299 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 CDC40O60508 579 aaKnown RBP eCLIP2.84□□□□□ -1.95
NUP54-209ENST00000510569 ALOX12BO75342 701 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 MED6O75586 246 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 C1orf105O95561 183 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 IGSF6O95976 241 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 BCKDHAP12694 445 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CSNK2A2P19784 350 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 WARSP23381 471 aaKnown RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 RPL4P36578 427 aaKnown RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 GSSP48637 474 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 EMDP50402 254 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CRISP1P54107 249 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 RHOAP61586 193 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 RBX1P62877 108 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 RGS1Q08116 209 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 GNMTQ14749 295 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 MAPK14Q16539 360 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 TAL2Q16559 108 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 DEFB115Q30KQ5 88 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 TRMT5Q32P41 509 aaKnown RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 SPIN4Q56A73 249 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 TMEM42Q69YG0 159 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 FAM199XQ6PEV8 388 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 ATRAIDQ6UW56 229 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ZNF836Q6ZNA1 936 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 IDO2Q6ZQW0 420 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 C3orf62Q6ZUJ4 267 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 HSD11B1LQ7Z5J1 315 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CMC1Q7Z7K0 106 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 S100A7AQ86SG5 101 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 NRMQ8IXM6 262 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 C9orf40Q8IXQ3 194 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms