RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CLDN15P56746 228 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 CLDN18P56856 261 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 RAC3P60763 192 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 BTN1A1Q13410 526 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ENDOGQ14249 297 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ZNF273Q14593 569 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ATXN7L3Q14CW9 347 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 SURF2Q15527 256 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 KISS1Q15726 138 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 SGCAQ16586 387 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 PDSS1Q5T2R2 415 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 RTN4RL2Q86UN3 420 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 OR10D3Q8NH80 312 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 PIK3IP1Q96FE7 263 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 LYZL4Q96KX0 146 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ZNF75AQ96N20 296 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 SRXN1Q9BYN0 137 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 SPRR3Q9UBC9 169 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 ATMQ13315 3056 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 BOD1L1Q8NFC6 3051 aa13.97□□□□□ -0.17
SQSTM1-213ENST00000510187 RAB19A4D1S5 217 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 CXCL13O43927 109 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 CRYABP02511 175 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 KLK2P20151 261 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 ECI1P42126 302 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 ARFRP1Q13795 201 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 FAM74A1Q5RGS3 127 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM123Q8N131 208 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 OR51T1Q8NGJ9 327 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 NABP1Q96AH0 204 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 CHST5Q9GZS9 411 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 TAS2R3Q9NYW6 316 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 OSGIN2Q9Y236 505 aa13.96□□□□□ -0.17
SQSTM1-213ENST00000510187 IGHV3-15A0A0B4J1V0 119 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 DHRS7CA6NNS2 312 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 NUDT19A8MXV4 375 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 FGF16O43320 207 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 DNPH1O43598 174 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 MTRF1O75570 445 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 WISP2O76076 250 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 TPT1P13693 172 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 SLC30A7Q8NEW0 376 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 OR5AP2Q8NGF4 316 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 DCUN1D4Q92564 292 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF407Q9C0G0 2248 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 ZZEF1O43149 2961 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 A0A1W2PP11 408 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 FIGNL2A6NMB9 653 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 NPIPA2E9PIF3 369 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 NPIPA3F8WFD2 350 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 TSPAN4O14817 238 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 DHHO43323 396 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 ANOS1P23352 680 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 CPT2P23786 658 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 OR3A2P47893 321 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 NPY4RP50391 375 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 GFOD2Q3B7J2 385 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 CRIP3Q6Q6R5 217 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 FAM180AQ6UWF9 173 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 CLEC18BQ6UXF7 455 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 OR9K2Q8NGE7 335 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 OR13G1Q8NGZ3 307 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 CPNE4Q96A23 557 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF845Q96IR2 970 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 UCN2Q96RP3 112 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 KIAA1549Q9HCM3 1950 aa13.95□□□□□ -0.18
SQSTM1-213ENST00000510187 SPENQ96T58 3664 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 C13orf42A0A1B0GVH6 325 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 PET100P0DJ07 73 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 ATF4P18848 351 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF84P51523 738 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 C3AR1Q16581 482 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 BEX5Q5H9J7 111 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 PRSS54Q6PEW0 395 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 Q8NA96 180 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 EMG1Q92979 244 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 SPTSSAQ969W0 71 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 MARC2Q969Z3 335 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 RTBDNQ9BSG5 229 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 RNF126Q9BV68 326 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 PECRQ9BY49 303 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 PLSCR2Q9NRY7 297 aa13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 FOXD3Q9UJU5 478 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-213ENST00000510187 DNAJC13O75165 2243 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 PIEZO2Q9H5I5 2752 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 E9PLN8 166 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 TRIM77I1YAP6 450 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 AQP7O14520 342 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 PGAM2P15259 253 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 SNU13P55769 128 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 SUPT4H1P63272 117 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 STK11Q15831 433 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 PHYHD1Q5SRE7 291 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 AADACL3Q5VUY0 350 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 ELP2Q6IA86 826 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 CSNK2A3Q8NEV1 391 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms