RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 OR51J1Q9H342 316 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 CHCHD3Q9NX63 227 aaKnown RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 DNAJB9Q9UBS3 223 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 OR14J1Q9UGF5 321 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 IER3IP1Q9Y5U9 82 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 LINC00312Q9Y6C7 94 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 hADV38S2A0JD32 116 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 TRPC5OSA6NMA1 111 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 LY6LH3BQJ8 138 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 BUB1B-PAK6H3BSN5 160 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 UBDO15205 165 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 SERPINA1P01009 418 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 CST4P01036 141 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ANXA2P07355 339 aaKnown RBP8.26□□□□□ -1.09
SNF8-207ENST00000509995 PSKH1P11801 424 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ACKR3P25106 362 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 GNG3P63215 75 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 PITPNAQ00169 270 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 KIAA0141Q14154 515 aaPredicted RBP8.26□□□□□ -1.09
SNF8-207ENST00000509995 HLA-DRB5Q30154 266 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ZBTB46Q86UZ6 589 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ZNF491Q8N8L2 437 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 PIGCQ92535 297 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ZNF488Q96MN9 340 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 ABCG5Q9H222 651 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 RPRD1BQ9NQG5 326 aaKnown RBP8.26□□□□□ -1.09
SNF8-207ENST00000509995 BAG5Q9UL15 447 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 VSIG4Q9Y279 399 aa8.26□□□□□ -1.09
SNF8-207ENST00000509995 FAM172BPA6NC97 362 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 ZNF732B4DXR9 585 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 ZNF737O75373 536 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 SPARCP09486 303 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 VDAC1P21796 283 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 FASP25445 335 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 CX3CR1P49238 355 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 RPS6KA3P51812 740 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 HNF4GQ14541 408 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 TAF13Q15543 124 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 HAGHLQ6PII5 290 aaPredicted RBP8.25□□□□□ -1.09
SNF8-207ENST00000509995 DCXRQ7Z4W1 244 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 GTSCR1Q86UQ5 136 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 TIGD4Q8IY51 512 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 LINC00471Q8N535 108 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 UBLCP1Q8WVY7 318 aaPredicted RBP8.25□□□□□ -1.09
SNF8-207ENST00000509995 LZICQ8WZA0 190 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 SPDL1Q96EA4 605 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 FAM46AQ96IP4 442 aaKnown RBP8.25□□□□□ -1.09
SNF8-207ENST00000509995 NMNAT3Q96T66 252 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 THAP7Q9BT49 309 aaPredicted RBP8.25□□□□□ -1.09
SNF8-207ENST00000509995 RABEP2Q9H5N1 569 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 STUB1Q9UNE7 303 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 SIGLEC7Q9Y286 467 aa8.25□□□□□ -1.09
SNF8-207ENST00000509995 TLDC2A0PJX2 215 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ZNF878C9JN71 531 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 LINC01619G3V211 115 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 BIRC5O15392 142 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 NXPH2O95156 264 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 RENP00797 406 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 MTPNP58546 118 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 EDDM3AQ14507 147 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 PRAMEF5Q5TYX0 476 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 OR52W1Q6IF63 320 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ZNF730Q6ZMV8 503 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 DPY19L2P2Q6ZN68 376 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 MBOAT2Q6ZWT7 520 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 PRSS45Q7RTY3 260 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ANKRD13BQ86YJ7 626 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 TGIF2LXQ8IUE1 241 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 FUNDC1Q8IVP5 155 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 RNF113BQ8IZP6 322 aaKnown RBP8.24□□□□□ -1.09
SNF8-207ENST00000509995 OFCC1Q8IZS5 231 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 OR8H2Q8N162 312 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 TMEM106AQ96A25 262 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 RNF166Q96A37 237 aaPredicted RBP8.24□□□□□ -1.09
SNF8-207ENST00000509995 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ALX4Q9H161 411 aaPredicted RBP8.24□□□□□ -1.09
SNF8-207ENST00000509995 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ZNF286AQ9HBT8 521 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 PCDHB16Q9NRJ7 776 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 CENPMQ9NSP4 180 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 LIN7CQ9NUP9 197 aaKnown RBP8.24□□□□□ -1.09
SNF8-207ENST00000509995 SIGLEC8Q9NYZ4 499 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 ZNF319Q9P2F9 582 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 SLC22A13Q9Y226 551 aa8.24□□□□□ -1.09
SNF8-207ENST00000509995 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
SNF8-207ENST00000509995 A0A087WUU8 490 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 A0A1W2PPI3 338 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 SHISA3A0PJX4 238 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 IGKV1D-33P01593 117 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 IGKV1-33P01594 117 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 CD34P28906 385 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 IFNA8P32881 189 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 SLC18A1P54219 525 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 FXYD6P3P58550 94 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 ZP1P60852 638 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 CBX1P83916 185 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 EWSR1Q01844 656 aaKnown RBP eCLIP8.23□□□□□ -1.09
SNF8-207ENST00000509995 MFGE8Q08431 387 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 281.4 ms