RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ACOD1A6NK06 481 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 K7N7A8 449 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 CST1P01037 141 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 ARG1P05089 322 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 RAP2AP10114 183 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 PAICSP22234 425 aaKnown RBP12.77□□□□□ -0.37
RAB40C-202ENST00000509637 MPZP25189 248 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 CD83Q01151 205 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 COL10A1Q03692 680 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 FAM98BQ52LJ0 330 aaKnown RBP12.77□□□□□ -0.37
RAB40C-202ENST00000509637 SLC35D3Q5M8T2 416 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 SGCDQ92629 289 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 SLC25A19Q9HC21 320 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 RAB18Q9NP72 206 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 IL36RNQ9UBH0 155 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 SLC22A13Q9Y226 551 aa12.77□□□□□ -0.37
RAB40C-202ENST00000509637 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 DHRS3O75911 302 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 HMGN1P05114 100 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 RPS7P62081 194 aaKnown RBP12.76□□□□□ -0.37
RAB40C-202ENST00000509637 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
RAB40C-202ENST00000509637 SMIM21Q3B7S5 101 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 UTF1Q5T230 341 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 DEGS2Q6QHC5 323 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 ASRGL1Q7L266 308 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF679Q8IYX0 411 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 ENPP5Q9UJA9 477 aa12.76□□□□□ -0.37
RAB40C-202ENST00000509637 FAM90A22PA8MWA6 464 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 H3BSH0 61 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 PRKYO43930 277 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 NXPH2O95156 264 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 MPIG6BO95866 241 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF728P0DKX0 622 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 IGHV1-8P0DP01 117 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 CD24P25063 80 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 EPHA2P29317 976 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 LGALS4P56470 323 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 EFNB1P98172 346 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF684Q5T5D7 378 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 SSX6Q7RTT6 188 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 ELMOD2Q8IZ81 293 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 MUC13Q9H3R2 512 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 TVP23BQ9NYZ1 205 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 MRM2Q9UI43 246 aaKnown RBP12.75□□□□□ -0.37
RAB40C-202ENST00000509637 HILPDAQ9Y5L2 63 aa12.75□□□□□ -0.37
RAB40C-202ENST00000509637 KIAA2026Q5HYC2 2103 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 SH2D7A6NKC9 451 aaPredicted RBP12.74□□□□□ -0.37
RAB40C-202ENST00000509637 SLC1A7O00341 560 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 GSC2O15499 205 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 XPNPEP2O43895 674 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 INMTO95050 263 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 IGHA1P01876 353 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 GNGT1P63211 74 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 CLVS2Q5SYC1 327 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 COMMD2Q86X83 199 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF573Q86YE8 665 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
RAB40C-202ENST00000509637 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
RAB40C-202ENST00000509637 CCDC124Q96CT7 223 aaKnown RBP12.74□□□□□ -0.37
RAB40C-202ENST00000509637 PRSS22Q9GZN4 317 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 NDE1Q9NXR1 346 aa12.74□□□□□ -0.37
RAB40C-202ENST00000509637 TBL2Q9Y4P3 447 aaKnown RBP12.74□□□□□ -0.37
RAB40C-202ENST00000509637 RYR3Q15413 4870 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 DLGAP1O14490 977 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 AMY1AP04745 511 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 AMY2AP04746 511 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 GDNFP39905 211 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 DAPP51397 102 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 DYNLT3P51808 116 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 SNAPC1Q16533 368 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 KCTD18Q6PI47 426 aaPredicted RBP12.73□□□□□ -0.37
RAB40C-202ENST00000509637 OR4S1Q8NGB4 309 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 CADM1Q9BY67 442 aaKnown RBP12.73□□□□□ -0.37
RAB40C-202ENST00000509637 MROQ9BYG7 248 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 OR52A1Q9UKL2 312 aa12.73□□□□□ -0.37
RAB40C-202ENST00000509637 PSPNO60542 156 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 MITFO75030 526 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF254O75437 659 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 CALCBP10092 127 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
RAB40C-202ENST00000509637 CRISP1P54107 249 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 EDDM3BP56851 147 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms