RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 UBE2NP61088 152 aaKnown RBP12.82□□□□□ -0.36
PHF3-209ENST00000509330 IGFL2Q6UWQ7 119 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 FAM214BQ7L5A3 538 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 LIX1LQ8IVB5 337 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 OSR2Q8N2R0 312 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 OR10AD1Q8NGE0 317 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 ELMOD3Q96FG2 381 aa12.82□□□□□ -0.36
PHF3-209ENST00000509330 FOXI3A8MTJ6 420 aaPredicted RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 IGHG3P01860 377 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SELEP16581 610 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 BCL3P20749 454 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 CD34P28906 385 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 HTR2BP41595 481 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 IL13RA1P78552 427 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 ZNF169Q14929 603 aaPredicted RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 SLC9A3R2Q15599 337 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 CHRFAM7AQ494W8 412 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 C6orf183Q5T699 404 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 WBP1Q96G27 269 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 MED30Q96HR3 178 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SPTBN4Q9H254 2564 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 F5H5P2 479 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 CA6P23280 308 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SORDQ00796 357 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SNIP1Q8TAD8 396 aaKnown RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 SPSB4Q96A44 273 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 TM2D1Q9BX74 207 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SLA2Q9H6Q3 261 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 NPTNQ9Y639 398 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 ALX3O95076 343 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 KNG1P01042 644 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 ATXN7L3Q14CW9 347 aaPredicted RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 ZDHHC23Q8IYP9 409 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 OR13G1Q8NGZ3 307 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 CMSS1Q9BQ75 279 aaKnown RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 PDCD10Q9BUL8 212 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 OPN3Q9H1Y3 402 aaPredicted RBP12.81□□□□□ -0.36
PHF3-209ENST00000509330 FZR1Q9UM11 496 aa12.81□□□□□ -0.36
PHF3-209ENST00000509330 SYNGR1O43759 233 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 KIR2DL2P43627 348 aaPredicted RBP12.8□□□□□ -0.36
PHF3-209ENST00000509330 ARPC4P59998 168 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 RTP5Q14D33 572 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 ALKBH6Q3KRA9 238 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 RPUSD3Q6P087 351 aaKnown RBP12.8□□□□□ -0.36
PHF3-209ENST00000509330 HAGHLQ6PII5 290 aaPredicted RBP12.8□□□□□ -0.36
PHF3-209ENST00000509330 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 SPICQ8N5J4 248 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 OR2J1Q9GZK6 312 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 SS18L1O75177 396 aaPredicted RBP12.8□□□□□ -0.36
PHF3-209ENST00000509330 HOXA4Q00056 320 aaPredicted RBP12.8□□□□□ -0.36
PHF3-209ENST00000509330 GRK1Q15835 563 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 PNLIPRP3Q17RR3 467 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 CCDC54Q8NEL0 328 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 SARAFQ96BY9 339 aa12.8□□□□□ -0.36
PHF3-209ENST00000509330 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
PHF3-209ENST00000509330 GLRA1P23415 457 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
PHF3-209ENST00000509330 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 NUDT16L1Q9BRJ7 211 aaKnown RBP12.79□□□□□ -0.36
PHF3-209ENST00000509330 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 CADP27708 2225 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 ADGRG4Q8IZF6 3080 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 SPTA1P02549 2419 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 CXCL2P19875 107 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
PHF3-209ENST00000509330 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 PCNX1Q96RV3 2341 aa12.79□□□□□ -0.36
PHF3-209ENST00000509330 C13orf42A0A1B0GVH6 325 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 OR5H14A6NHG9 310 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 EEF1E1-BLOC1S5C9J1V9 151 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 KCNAB3O43448 404 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 GLI4P10075 376 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 PGAM2P15259 253 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 FAM189A2Q15884 450 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 LY6G6FQ5SQ64 297 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 IGF2-ASQ6U949 168 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 TOMM40LQ969M1 308 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 HIST1H2AAQ96QV6 131 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 SLC2A8Q9NY64 477 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 AQP7O14520 342 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 FXYD4P59646 89 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms