RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TNFAIP8O95379 198 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 ECDO95905 644 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 LALBAP00709 142 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 GYPAP02724 150 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 LIPFP07098 398 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 IL2RGP31785 369 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 RBMXP38159 391 aaKnown RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 POU3F4P49335 361 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 IL13RA1P78552 427 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 PDZK1IP1Q13113 114 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 TPBGQ13641 420 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 DOC2BQ14184 412 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 KISS1Q15726 138 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 ATPAF1Q5TC12 328 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 DCAF12L2Q5VW00 463 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 SLC25A26Q70HW3 274 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 Q71RC1 249 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 CDH26Q8IXH8 852 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 RGP1Q92546 391 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 OR5M11Q96RB7 305 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 GPER1Q99527 375 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 S100A13Q99584 98 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 MGLLQ99685 303 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 NRIP2Q9BQI9 281 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 FGF23Q9GZV9 251 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 SHARPINQ9H0F6 387 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 SLITRK2Q9H156 845 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 METTL17Q9H7H0 456 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 SMURF1Q9HCE7 757 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 HIF1ANQ9NWT6 349 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 SIRT4Q9Y6E7 314 aaPredicted RBP7.64□□□□□ -1.19
NUP54-207ENST00000508583 MTORP42345 2549 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 MALRD1Q5VYJ5 2156 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 LOC105371242A0A075B767 164 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 IGKV1-9A0A0C4DH69 117 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 FAM157AC9JC47 383 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 SYNGR1O43759 233 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ENSAO43768 121 aaKnown RBP7.63□□□□□ -1.19
NUP54-207ENST00000508583 GPX5O75715 221 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ARL6IP5O75915 188 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 KNG1P01042 644 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 TMEM225BP0DP42 221 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 CPEP16870 476 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 EGR1P18146 543 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 BDKRB2P30411 391 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 GABRA5P31644 462 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 GMFBP60983 142 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 KRTAP1-1Q07627 177 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 DMRTC1Q5HYR2 192 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 SPIN3Q5JUX0 258 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 FAM201AQ5SY85 155 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 DDI2Q5TDH0 399 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 LIPKQ5VXJ0 399 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 STUMQ69YW2 141 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ZNF529Q6P280 563 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ZNF773Q6PK81 442 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ACP7Q6ZNF0 438 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ANGPTL5Q86XS5 388 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 CALHM1Q8IU99 346 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ZNF561Q8N587 486 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 EMG1Q92979 244 aaKnown RBP7.63□□□□□ -1.19
NUP54-207ENST00000508583 DMRTB1Q96MA1 342 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 DERL3Q96Q80 235 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 OR14A2Q96R54 314 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 MRI1Q9BV20 369 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 TMED9Q9BVK6 235 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 LPAR2Q9HBW0 351 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 HES4Q9HCC6 221 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 TCF7L1Q9HCS4 588 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 ACOT13Q9NPJ3 140 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 TAS2R4Q9NYW5 299 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 NF1P21359 2839 aa7.63□□□□□ -1.19
NUP54-207ENST00000508583 WNK2Q9Y3S1 2297 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 IGKV1-27A0A075B6S5 117 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 IGHV3OR15-7A0A075B7D8 119 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 TRBV5-7A0A0A0MS05 114 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 A0A1W2PPH5 198 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 SIGLEC5O15389 551 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ZNF780AO75290 641 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 RGS9O75916 674 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 PLATP00750 562 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ZNF93P35789 620 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 TGFBR2P37173 567 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 MAP2K4P45985 399 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 GABRA2P47869 451 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 MTNR1BP49286 362 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ERVK11-1P61568 191 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 RPS11P62280 158 aaKnown RBP eCLIP7.62□□□□□ -1.19
NUP54-207ENST00000508583 LCN2P80188 198 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 EMX1Q04741 257 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 GPR176Q14439 515 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 CHRFAM7AQ494W8 412 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ACSM3Q53FZ2 586 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 HSD17B12Q53GQ0 312 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 UBE2UQ5VVX9 321 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 WDR25Q64LD2 544 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 FAHD2BQ6P2I3 314 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 SATL1Q86VE3 508 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 PHC2Q8IXK0 858 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms