RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FAM231DQ6ZW35 169 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 TRMT10CQ7L0Y3 403 aaKnown RBP2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 CALHM3Q86XJ0 350 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 CYP4Z2PQ8N1L4 340 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 SYS1Q8N2H4 156 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 CCNYL1Q8N7R7 359 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR6K2Q8NGY2 324 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 CACNG8Q8WXS5 425 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 ZNF75CPQ92670 426 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 CDKL2Q92772 493 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 SPACA5Q96QH8 159 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 LHX5Q9H2C1 402 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 ABCB9Q9NP78 766 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 C12orf4Q9NQ89 552 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 RBM22Q9NW64 420 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 SDHAF2Q9NX18 166 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 ANXA10Q9UJ72 324 aa2.11□□□□□ -2.07
HMGB1P28-201ENST00000507778 RPRD2Q5VT52 1461 aaKnown RBP2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 SLC5A10A0PJK1 596 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 GOLGA6L4A6NEF3 574 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 VAPBO95292 243 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 NRASP01111 189 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 HRASP01112 189 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 KRASP01116 189 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 BGNP21810 368 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 CCNOP22674 350 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 HTR2BP41595 481 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 NUDT2P50583 147 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 XIAPP98170 497 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 PRKCDQ05655 676 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 MEF2CQ06413 473 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 BIKQ13323 160 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 TMEM69Q5SWH9 247 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 APOBEC3HQ6NTF7 200 aaKnown RBP2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 ATPAF2Q8N5M1 289 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 PHF10Q8WUB8 498 aaKnown RBP2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 BEX2Q9BXY8 128 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 ANGPTL4Q9BY76 406 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 PRORYQ9H606 182 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 PARP11Q9NR21 331 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 INIPQ9NRY2 104 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 KLF13Q9Y2Y9 288 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 SLC22A7Q9Y694 548 aa2.1□□□□□ -2.07
HMGB1P28-201ENST00000507778 IZUMO1RA6ND01 250 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ZNF233A6NK53 670 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 C9JQL5 133 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 NDUFS8O00217 210 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 UPK1AO00322 258 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 DHRS3O75911 302 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR2A4O95047 310 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR5AC1P0C628 307 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 TUFMP49411 452 aaKnown RBP2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 SLC18A1P54219 525 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ELOCQ15369 112 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 LINC00303Q3SY05 128 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ZFAND6Q6FIF0 208 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 UGT2A3Q6UWM9 527 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 FAM131AQ6UXB0 335 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 PRNTQ86SH4 94 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 LINC00337Q8N6G1 96 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ZDHHC22Q8N966 263 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 LINC00304Q8N9R0 145 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR5H2Q8NGV7 314 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 DOK4Q8TEW6 326 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ADTRPQ96IZ2 230 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 GLT1D1Q96MS3 346 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR2A7Q96R45 310 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 PEBP4Q96S96 227 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 VAT1Q99536 393 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 SHCBP1LQ9BZQ2 653 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 PORCNQ9H237 461 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 RDH14Q9HBH5 336 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 ACOT13Q9NPJ3 140 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 OR2S2Q9NQN1 319 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 STMN3Q9NZ72 180 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 INSIG2Q9Y5U4 225 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 DOCK8Q8NF50 2099 aa2.09□□□□□ -2.07
HMGB1P28-201ENST00000507778 BRWD3Q6RI45 1802 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 KIR2DS1A0A191URI9 304 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 OR2AT4A6NND4 320 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 VGLL3A8MV65 326 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 SPOPO43791 374 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 ZMPSTE24O75844 475 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 SC5DO75845 299 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 KCNK2O95069 426 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 CXorf1O96002 111 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 RLN2P04090 185 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 CDK1P06493 297 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 S100A9P06702 114 aaKnown RBP2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 TAC1P20366 129 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 TEAD1P28347 426 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 DSTNP60981 165 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 ATP6AP1LQ52LC2 224 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 MRPL2Q5T653 305 aaKnown RBP2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 FAHD1Q6P587 224 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 PDCL2Q8N4E4 241 aa2.08□□□□□ -2.08
HMGB1P28-201ENST00000507778 OR4D6Q8NGJ1 314 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms