RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KRT71Q3SY84 523 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ANKDD1AQ495B1 522 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ZBED5Q49AG3 693 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 FAM76BQ5HYJ3 339 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 LRIF1Q5T3J3 769 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 FAM122BQ7Z309 247 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 GTSCR1Q86UQ5 136 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ZNF575Q86XF7 245 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 THNSL2Q86YJ6 484 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 TPRX1Q8N7U7 411 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ZNF491Q8N8L2 437 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 C11orf65Q8NCR3 313 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 CSNK2A3Q8NEV1 391 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 OR56B4Q8NH76 319 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ITFG2Q969R8 447 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 SPSB4Q96A44 273 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 TAMM41Q96BW9 452 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 OR8B4Q96RC9 309 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 NDEL1Q9GZM8 345 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 KLK15Q9H2R5 256 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 RASL12Q9NYN1 266 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ZIM2Q9NZV7 527 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 VAPAQ9P0L0 249 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 GLS2Q9UI32 602 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 hADV38S2A0JD32 116 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 HTR3EA5X5Y0 456 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A18PA6NE21 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A16PA6NEW6 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A20PA6NIJ5 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A9PA6NNJ1 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A12PA8MX19 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A5PA8MXJ8 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 BUB1B-PAK6H3BSN5 160 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 K7N7A8 449 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FGF16O43320 207 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 RRP9O43818 475 aaKnown RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 NXPH2O95156 264 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 IGHG4P01861 327 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A15PP0C7V4 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A13PP0C7W8 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A14PP0C7W9 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM90A24PP0C7X0 464 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 HOXB9P17482 250 aaPredicted RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 GPX2P18283 190 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FASP25445 335 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 NOS3P29474 1203 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 GPR4P46093 362 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 ESRRGP62508 458 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 EWSR1Q01844 656 aaKnown RBP eCLIP5.52□□□□□ -1.53
VCAN-207ENST00000507162 PRKCDQ05655 676 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
VCAN-207ENST00000507162 ST3GAL3Q11203 375 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 KIAA0141Q14154 515 aaPredicted RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 CYP51A1Q16850 503 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 PRAMEF5Q5TYX0 476 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 HAGHLQ6PII5 290 aaPredicted RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 SMARCD3Q6STE5 483 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 LYPD4Q6UWN0 246 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FAM57BQ71RH2 274 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 TRAPPC6BQ86SZ2 158 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 FTMTQ8N4E7 242 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 MREGQ8N565 214 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 OR4C15Q8NGM1 316 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 AQP3Q92482 292 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 RGP1Q92546 391 aaPredicted RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 UBE2E2Q96LR5 201 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 KCTD7Q96MP8 289 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 SORT1Q99523 831 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 NRIP2Q9BQI9 281 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 OR51I2Q9H344 312 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 PLEKHA3Q9HB20 300 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 BRD7Q9NPI1 651 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 CHCHD3Q9NX63 227 aaKnown RBP5.52□□□□□ -1.53
VCAN-207ENST00000507162 NDE1Q9NXR1 346 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 STUB1Q9UNE7 303 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 CORO2BQ9UQ03 480 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 SLC22A13Q9Y226 551 aa5.52□□□□□ -1.53
VCAN-207ENST00000507162 A0A0J9YWU9 116 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 hCG_38984A0A1B0GV85 526 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 TVP23AA6NH52 213 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 FAM183AA6NL82 134 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 CDC42EP2O14613 210 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RENP00797 406 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 IGKV1D-33P01593 117 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 IGKV1-33P01594 117 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 TFAP2AP05549 437 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 KITP10721 976 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PSMB8P28062 276 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 IFNA8P32881 189 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 KIR3DL2P43630 455 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 YAP1P46937 504 aaKnown RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 CX3CR1P49238 355 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PRRX1P54821 245 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 GYS2P54840 703 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 ZP1P60852 638 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 GNG3P63215 75 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RUNX1Q01196 453 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms