RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 EXOSC4Q9NPD3 245 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 LHX9Q9NQ69 397 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 PRSS16Q9NQE7 514 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 NANSQ9NR45 359 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 IMP3Q9NV31 184 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 EMC3Q9P0I2 261 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 COPZ2Q9P299 210 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 MYEF2Q9P2K5 600 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 CACNG5Q9UF02 275 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 KLHL21Q9UJP4 597 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 AK6Q9Y3D8 172 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 KPTNQ9Y664 436 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 LRP4O75096 1905 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 UTRNP46939 3433 aa3.56□□□□□ -1.84
CALCOCO2-208ENST00000506971 MDC1Q14676 2089 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 TRBV9A0A0B4J1U6 114 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 A0A1W2PRD5 423 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 TRAPPC13A5PLN9 417 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FABP12A6NFH5 140 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CENPXA8MT69 81 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SIRPB1O00241 398 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SURF4O15260 269 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ATP6V0E1O15342 81 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 IDH3BO43837 385 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ORC5O43913 435 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 GPX5O75715 221 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CCNKO75909 580 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ARL6IP5O75915 188 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 AIFM1O95831 613 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 TSHBP01222 138 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 HBQ1P09105 142 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CT62P0C5K7 136 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR12D1P0DN82 309 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 IL7P13232 177 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 RPS4Y1P22090 263 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 MYL9P24844 172 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 HLA-DMAP28067 261 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ERP29P30040 261 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 DRD3P35462 400 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OPRD1P41143 372 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OMPP47874 163 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 INPP1P49441 399 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 RAG2P55895 527 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CTBP2P56545 445 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR2B6P58173 313 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 PITPNAQ00169 270 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 IFITM3Q01628 133 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SLAMF1Q13291 335 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 QPRTQ15274 297 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 IRF4Q15306 451 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZNHIT3Q15649 155 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 UBE2V2Q15819 145 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SSX1Q16384 188 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ISXQ2M1V0 245 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 PGGHGQ32M88 737 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 TCEAL5Q5H9L2 206 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FAM78AQ5JUQ0 283 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 RSBN1Q5VWQ0 802 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 PLET1Q6UQ28 207 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FAM131AQ6UXB0 335 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZNF620Q6ZNG0 422 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 C19orf35Q6ZS72 473 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OOSP2Q86WS3 158 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 LRRC28Q86X40 367 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CATSPERDQ86XM0 798 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 PLCZ1Q86YW0 608 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZNF440Q8IYI8 595 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 DND1Q8IYX4 353 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 SELENOHQ8IZQ5 122 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 JAGN1Q8N5M9 183 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 EID2Q8N6I1 236 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ACBD7Q8N6N7 88 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 C15orf54Q8N8G6 183 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 LRRC75AQ8NAA5 344 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 LINC01555Q8NAE3 123 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZSCAN4Q8NAM6 433 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 INO80EQ8NBZ0 244 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZNF740Q8NDX6 193 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 C19orf18Q8NEA5 215 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR4F17Q8NGA8 305 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR52I1Q8NGK6 324 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR6T1Q8NGN1 323 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR1B1Q8NGR6 318 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR4F5Q8NH21 305 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR52P1PQ8NH57 321 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 NEIL3Q8TAT5 605 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 LCN9Q8WX39 176 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FGF13Q92913 245 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 FGF11Q92914 225 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 RAB8BQ92930 207 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 RERGQ96A58 199 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CREB3L1Q96BA8 519 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 CNRIP1Q96F85 164 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 ZNF681Q96N22 645 aa3.55□□□□□ -1.84
CALCOCO2-208ENST00000506971 OR4F4Q96R69 305 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms