RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 SLC25A44Q96H78 314 aaPredicted RBP1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 C20orf144Q9BQM9 153 aa1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 EXO5Q9H790 373 aa1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 ABCB9Q9NP78 766 aa1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 ZC4H2Q9NQZ6 224 aa1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 RHBDD3Q9Y3P4 386 aa1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 PRRC2BQ5JSZ5 2229 aaKnown RBP1.16□□□□□ -2.22
CDC42SE2-210ENST00000506929 SYNGR2O43760 224 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 GCGP01275 180 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 CDK1P06493 297 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 CGB3P0DN86 165 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 CGB7P0DN87 165 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ANXA8P13928 327 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 CD99P14209 185 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 CBR1P16152 277 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 HLA-GP17693 338 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 GABRR2P28476 465 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ARL2P36404 184 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 COILP38432 576 aaPredicted RBP1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 TMEM241Q24JQ0 296 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ANXA8L1Q5VT79 327 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 MSRB3Q8IXL7 192 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 MICU2Q8IYU8 434 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ZFP82Q8N141 532 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 OR4K2Q8NGD2 314 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ASB7Q9H672 318 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 MRPL22Q9NWU5 206 aaKnown RBP1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ACOT9Q9Y305 439 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 ZNF337Q9Y3M9 751 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 JCADQ9P266 1359 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 SPATA31E1Q6ZUB1 1445 aa1.15□□□□□ -2.23
CDC42SE2-210ENST00000506929 IGHV2OR16-5A0A0B4J2B6 119 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 GOLGA8JA6NMD2 632 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 D6RAR5 112 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 DFFAO00273 331 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 IGHV3-53P01767 116 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 OR4Q2P0C623 313 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 GOLGA8HP0CJ92 632 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 GFAPP14136 432 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 CSRP1P21291 193 aaKnown RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 GALP22466 123 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 CLDN6P56747 220 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 CLDN18P56856 261 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 RPL10AP62906 217 aaKnown RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 FOXF1Q12946 379 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 TPBGQ13641 420 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 IL18Q14116 193 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 ENDOGQ14249 297 aaKnown RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 LGALSLQ3ZCW2 172 aaPredicted RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 PCOTHQ58A44 107 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 MRPL2Q5T653 305 aaKnown RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 CLEC18BQ6UXF7 455 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 Q8NAQ8 132 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 TFGQ92734 400 aaPredicted RBP1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 NAT6Q93015 286 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 YIPF5Q969M3 257 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 C20orf166-AS1Q96NR2 134 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 THTPAQ9BU02 230 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 DDIT4Q9NX09 232 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 ORC6Q9Y5N6 252 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 SHANK3Q9BYB0 1731 aa1.14□□□□□ -2.23
CDC42SE2-210ENST00000506929 ADAMTSL3P82987 1691 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 UPK1AO00322 258 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 KLK1P06870 262 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 PMCHP20382 165 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 CD9P21926 228 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 HCCSP53701 268 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 LCN2P80188 198 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 DEFB103AP81534 67 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 DHRS2Q13268 280 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 TTC32Q5I0X7 151 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 TPRG1LQ5T0D9 272 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 MLIPQ5VWP3 458 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 FAM231DQ6ZW35 169 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 AMN1Q8IY45 258 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 CYP4Z2PQ8N1L4 340 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 TCP10LQ8TDR4 215 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 PIH1D2Q8WWB5 315 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 SMIM8Q96KF7 97 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 TRIB3Q96RU7 358 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 MYCBPQ99417 103 aaPredicted RBP1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 MRPL20Q9BYC9 149 aaKnown RBP1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 VPS37BQ9H9H4 285 aa1.13□□□□□ -2.23
CDC42SE2-210ENST00000506929 IGKV1D-37A0A075B6S9 117 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 LOC100653049A0A140TA62 436 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 HSBP1O75506 76 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 KRT34O76011 436 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 OR2A4O95047 310 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 CDS2O95674 445 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 ZNF22P17026 224 aaPredicted RBP1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 CALRP27797 417 aaKnown RBP1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 ERFP50548 548 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 SLC18A1P54219 525 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 MLF1P58340 268 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 TAS2R39P59534 338 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 YWHAEP62258 255 aaKnown RBP1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 LAMTOR4Q0VGL1 99 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 MRPL21Q7Z2W9 205 aaKnown RBP1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 COMTD1Q86VU5 262 aa1.12□□□□□ -2.23
CDC42SE2-210ENST00000506929 COMMD1Q8N668 190 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms