RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CCDC54Q8NEL0 328 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 STEAP2Q8NFT2 490 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 OR2AK2Q8NG84 335 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SLAMF9Q96A28 289 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF488Q96MN9 340 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ATPIF1Q9UII2 106 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ANAPC10Q9UM13 185 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SPTA1P02549 2419 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 DISC1C4P0D8 188 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 CCSO14618 274 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SCGNO76038 276 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SERPINA5P05154 406 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 COX5BP10606 129 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF35P13682 527 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 APLNRP35414 380 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 EIF2S3P41091 472 aaKnown RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 HAAOP46952 286 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 FUT6P51993 359 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 PPP1R1AQ13522 171 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 STK11Q15831 433 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 LGALSLQ3ZCW2 172 aaPredicted RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 OR10AD1Q8NGE0 317 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 MED30Q96HR3 178 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SCNM1Q9BWG6 230 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 OPN3Q9H1Y3 402 aaPredicted RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 GPN1Q9HCN4 374 aaPredicted RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 EIF3KQ9UBQ5 218 aaKnown RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 AK3Q9UIJ7 227 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF391Q9UJN7 358 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 LHX6Q9UPM6 363 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SLC7A11Q9UPY5 501 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 NBASA2RRP1 2371 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 CD300LBA8K4G0 201 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SELEP16581 610 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF14P17017 642 aaPredicted RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 AMY2BP19961 511 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 BCL3P20749 454 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ATP1B3P54709 279 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 EMG1Q92979 244 aaKnown RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ZNF107Q9UII5 783 aaPredicted RBP10.48□□□□□ -0.73
LIN54-206ENST00000506560 ST3GAL6Q9Y274 331 aa10.48□□□□□ -0.73
LIN54-206ENST00000506560 ROS1P08922 2347 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 UBE2QL1A1L167 161 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 SYNGR1O43759 233 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 NAT1P18440 290 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 DUSP1P28562 367 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 HOXA4Q00056 320 aaPredicted RBP10.47□□□□□ -0.73
LIN54-206ENST00000506560 MEF2DQ14814 521 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 GABRA6Q16445 453 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 RPUSD3Q6P087 351 aaKnown RBP10.47□□□□□ -0.73
LIN54-206ENST00000506560 ASCL4Q6XD76 172 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 CSNK2A3Q8NEV1 391 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 OR13G1Q8NGZ3 307 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 PRRT1Q99946 306 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 SLC25A21Q9BQT8 299 aaPredicted RBP10.47□□□□□ -0.73
LIN54-206ENST00000506560 TRAF4Q9BUZ4 470 aaPredicted RBP10.47□□□□□ -0.73
LIN54-206ENST00000506560 GP6Q9HCN6 339 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 SLC2A8Q9NY64 477 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 ATRXP46100 2492 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 PQLC2LA1A4F0 135 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 ZNF732B4DXR9 585 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 CRYZL1O95825 349 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
LIN54-206ENST00000506560 IFNA6P05013 189 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 AKR1C4P17516 323 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 PNLIPRP3Q17RR3 467 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 LY6G6FQ5SQ64 297 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 RTL6Q6ICC9 239 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 Q6ZS92 163 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 SPICQ8N5J4 248 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 ZNF610Q8N9Z0 462 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 TMPRSS13Q9BYE2 586 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 LIME1Q9H400 295 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 PLEKHA6Q9Y2H5 1048 aa10.47□□□□□ -0.73
LIN54-206ENST00000506560 NOS1APO75052 506 aaPredicted RBP10.46□□□□□ -0.73
LIN54-206ENST00000506560 TNFSF13O75888 250 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 CA6P23280 308 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 CHATP28329 748 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 MALLQ13021 153 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 Q6ZT83 130 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 HOGA1Q86XE5 327 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 OSR2Q8N2R0 312 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 MARS2Q96GW9 593 aaKnown RBP10.46□□□□□ -0.73
LIN54-206ENST00000506560 OR2J1Q9GZK6 312 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 MTCH1Q9NZJ7 389 aa10.46□□□□□ -0.73
LIN54-206ENST00000506560 CHD8Q9HCK8 2581 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 LEUTXA8MZ59 168 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 PROB1E7EW31 1015 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 HSPB6O14558 160 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 TSPAN5P62079 268 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.74
LIN54-206ENST00000506560 IGFL3Q6UXB1 125 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms