RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ALX3O95076 343 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 AVPP01185 164 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 ADRA2CP18825 462 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 EPHA1P21709 976 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 VHLP40337 213 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 GABRA2P47869 451 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 WNT4P56705 351 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 FIP1L1Q6UN15 594 aaKnown RBP13.85□□□□□ -0.19
SNCA-209ENST00000506244 BTN2A1Q7KYR7 527 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 ANGPTL5Q86XS5 388 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 MKXQ8IYA7 352 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 OR5T2Q8NGG2 359 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 GATAD2BQ8WXI9 593 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 DMRTB1Q96MA1 342 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 GAFA1Q96PS6 74 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
SNCA-209ENST00000506244 ZNF281Q9Y2X9 895 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
SNCA-209ENST00000506244 ARHGAP32A7KAX9 2087 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 IGKV1D-17A0A075B6S4 117 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 IGKV1-27A0A075B6S5 117 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 OGG1O15527 345 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 PLATP00750 562 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 KNG1P01042 644 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 FSHBP01225 129 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 CDK1P06493 297 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 PSG2P11465 335 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 POU3F4P49335 361 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 CAV3P56539 151 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 RNLSQ5VYX0 342 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 XAF1Q6GPH4 301 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 SLC25A26Q70HW3 274 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 SDSLQ96GA7 329 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 MND1Q9BWT6 205 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 HES4Q9HCC6 221 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 ZNF222Q9UK12 451 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 RAB26Q9ULW5 256 aa13.84□□□□□ -0.19
SNCA-209ENST00000506244 ZNF879B4DU55 563 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 MAGEB3O15480 346 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 TCF21O43680 179 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 HCKP08631 526 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 RAB3AP20336 220 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 C21orf33P30042 268 aaPredicted RBP13.83□□□□□ -0.2
SNCA-209ENST00000506244 ERVK11-1P61568 191 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 BDH1Q02338 343 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 YIF1BQ5BJH7 314 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 METTL11BQ5VVY1 283 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 DMKNQ6E0U4 476 aaPredicted RBP13.83□□□□□ -0.2
SNCA-209ENST00000506244 BPIFB2Q8N4F0 458 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 ZNF561Q8N587 486 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 ZNF485Q8NCK3 441 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 TMEM185AQ8NFB2 350 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
SNCA-209ENST00000506244 THRSPQ92748 146 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 TMEM106AQ96A25 262 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 SLAMF9Q96A28 289 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 UPRTQ96BW1 309 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 ZNF488Q96MN9 340 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 CDCA4Q9BXL8 241 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 RASSF4Q9H2L5 321 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 Q9H521 79 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 RPUSD1Q9UJJ7 312 aaKnown RBP13.83□□□□□ -0.2
SNCA-209ENST00000506244 BLOC1S6Q9UL45 172 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 PCDHGB5Q9Y5G0 923 aa13.83□□□□□ -0.2
SNCA-209ENST00000506244 TRBV23-1A0A0A0MS06 115 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 A0A0A6YYJ9 748 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 A0A1B0GW55 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 RFPL4AA6NLU0 287 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 PTGES3LE9PB15 166 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 RFPL4AL1F8VTS6 287 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L2P0CJ85 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L3P0CJ86 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L4P0CJ87 422 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L5P0CJ88 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L6P0CJ89 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L7P0CJ90 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 NDUFB7P17568 137 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 AMY2BP19961 511 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 FPR2P25090 351 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 CAPZA1P52907 286 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 PPP3R1P63098 170 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4L9Q6RFH8 374 aaPredicted RBP13.82□□□□□ -0.2
SNCA-209ENST00000506244 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 NANOGP1Q8N7R0 232 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 H1FXQ92522 213 aaKnown RBP13.82□□□□□ -0.2
SNCA-209ENST00000506244 RGP1Q92546 391 aaPredicted RBP13.82□□□□□ -0.2
SNCA-209ENST00000506244 GHSRQ92847 366 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 EMG1Q92979 244 aaKnown RBP13.82□□□□□ -0.2
SNCA-209ENST00000506244 SUCNR1Q9BXA5 334 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 RHOFQ9HBH0 211 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 MTCH1Q9NZJ7 389 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 CKLFQ9UBR5 152 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 DUX4Q9UBX2 424 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 NUP50Q9UKX7 468 aa13.82□□□□□ -0.2
SNCA-209ENST00000506244 LALBAP00709 142 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 SELLP14151 372 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 PRDX2P32119 198 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 SOX2P48431 317 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms