RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CD27P26842 260 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 CLDN17P56750 224 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 ENDOGQ14249 297 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 ADAM5Q6NVV9 412 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 OXGR1Q96P68 337 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 CHST5Q9GZS9 411 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 AK3Q9UIJ7 227 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 NXT1Q9UKK6 140 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 RCL1Q9Y2P8 373 aaKnown RBP10.37□□□□□ -0.75
UBE3D-206ENST00000505226 FBXO7Q9Y3I1 522 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 B3GALT1Q9Y5Z6 326 aa10.37□□□□□ -0.75
UBE3D-206ENST00000505226 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 TRBV23-1A0A0A0MS06 115 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 FAM221AA4D161 298 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 C2CD4DB7Z1M9 353 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 SPRY1O43609 319 aaPredicted RBP10.36□□□□□ -0.75
UBE3D-206ENST00000505226 S100A8P05109 93 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF14P17017 642 aaPredicted RBP10.36□□□□□ -0.75
UBE3D-206ENST00000505226 PPP1CCP36873 323 aaKnown RBP10.36□□□□□ -0.75
UBE3D-206ENST00000505226 GRB2P62993 217 aaKnown RBP10.36□□□□□ -0.75
UBE3D-206ENST00000505226 TAF9Q16594 264 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 PLXDC2Q6UX71 529 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 WDSUB1Q8N9V3 476 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 RARRES2Q99969 163 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 TUBA4BQ9H853 241 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 MIOXQ9UGB7 285 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ADAMTS20P59510 1910 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 CCDC187A0A096LP49 1063 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 IFNA21P01568 189 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 SEC11BP0C7V7 166 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 SULT1A1P50225 295 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 FAM189A2Q15884 450 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 PHLDA2Q53GA4 152 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 IGSF11Q5DX21 431 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 Q6ZPA2 131 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 PLXDC1Q8IUK5 500 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 LURAP1LQ8IV03 231 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 HSD17B11Q8NBQ5 300 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ADPRHL1Q8NDY3 354 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 OR2M3Q8NG83 312 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
UBE3D-206ENST00000505226 SPSB2Q99619 263 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 PLEKHA2Q9HB19 425 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 GPR173Q9NS66 373 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 TXNL1O43396 289 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 OR13C7P0DN81 318 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 CCL20P78556 96 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ACER2Q5QJU3 275 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 NABP1Q96AH0 204 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 ABHD14AQ9BUJ0 271 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 TGIF2Q9GZN2 237 aa10.36□□□□□ -0.75
UBE3D-206ENST00000505226 IGHV3-15A0A0B4J1V0 119 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 E5RGE8 158 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 PPIHO43447 177 aaKnown RBP10.35□□□□□ -0.75
UBE3D-206ENST00000505226 PNLIPP16233 465 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 PMELP40967 661 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 GLP1RP43220 463 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 P2RY1P47900 373 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 CAMLGP49069 296 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 FXYD4P59646 89 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 HMGN3Q15651 99 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 OR2AE1Q8NHA4 323 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 RTN4IP1Q8WWV3 396 aaPredicted RBP10.35□□□□□ -0.75
UBE3D-206ENST00000505226 YPEL4Q96NS1 127 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 ZNF385AQ96PM9 386 aaKnown RBP10.35□□□□□ -0.75
UBE3D-206ENST00000505226 BCL2L14Q9BZR8 327 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 METTL7AQ9H8H3 244 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 NSG2Q9Y328 171 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 CELSR3Q9NYQ7 3312 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 IGLV3-32A0A0A0MS00 114 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 A0A0U1RQV5 110 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 AQP7P3A6NL99 342 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 HEXBP07686 556 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 CD63P08962 238 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 TCEAL3Q969E4 200 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 C18orf12Q96KH6 178 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 NAA60Q9H7X0 242 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 SEMA5BQ9P283 1151 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 MYOTQ9UBF9 498 aa10.35□□□□□ -0.75
UBE3D-206ENST00000505226 CA11O75493 328 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 PIAS2O75928 621 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 HNRNPKP61978 463 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBE3D-206ENST00000505226 SLC35A1P78382 337 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 CHAF1BQ13112 559 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 PDCD1Q15116 288 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 NCMAPQ5T1S8 102 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 SLC25A45Q8N413 288 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 OR5L1Q8NGL2 311 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 AKR7LQ8NHP1 331 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 CD300LFQ8TDQ1 290 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
UBE3D-206ENST00000505226 MSI2Q96DH6 328 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms