RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MKXQ8IYA7 352 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 BOLLQ8N9W6 283 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 DEFB108BQ8NET1 73 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 TMEM203Q969S6 136 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 C12orf43Q96C57 262 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 ORAI1Q96D31 301 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CPNE2Q96FN4 548 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 NARFLQ9H6Q4 476 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF665Q9H7R5 613 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 PATZ1Q9HBE1 687 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 NOX4Q9NPH5 578 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 NDUFB11Q9NX14 153 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 MIOXQ9UGB7 285 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CEACAM18A8MTB9 384 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 RGS9O75916 674 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 CYB5AP00167 134 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 WNT2P09544 360 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 UCHL1P09936 223 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 IGHV4-31P0DP07 118 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 GALP22466 123 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 GLRA1P23415 457 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 PSMB9P28065 219 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 BDKRB2P30411 391 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 IL2RGP31785 369 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 GZMKP49863 264 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 ERVK11-1P61568 191 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 INSL4Q14641 139 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 CD200R1LQ6Q8B3 271 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 SLC25A26Q70HW3 274 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 RNF144BQ7Z419 303 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 BIVMQ86UB2 503 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 CDH26Q8IXH8 852 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 SAXO1Q8IYX7 474 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 ZSCAN4Q8NAM6 433 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 C19orf18Q8NEA5 215 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 OR52N4Q8NGI2 321 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 MUL1Q969V5 352 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 TMIGD2Q96BF3 282 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 SPACA5Q96QH8 159 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 NRIP2Q9BQI9 281 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 WDR13Q9H1Z4 485 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 HES4Q9HCC6 221 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 MTCH1Q9NZJ7 389 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 PCDHB10Q9UN67 800 aa9.95□□□□□ -0.82
PDLIM5-208ENST00000504489 IGHV3OR15-7A0A075B7D8 119 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 MEGF11A6BM72 1044 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 GABRPO00591 440 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 JUNBP17275 347 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 POU3F4P49335 361 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 GP2P55259 537 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 ZP1P60852 638 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 FABP5Q01469 135 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 NEDD8Q15843 81 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 FAM27D1Q5T7N8 215 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 ATPAF1Q5TC12 328 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 DDI2Q5TDH0 399 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 STUMQ69YW2 141 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 CYB5R2Q6BCY4 276 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 ACP7Q6ZNF0 438 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 Q8IYB0 196 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 PXT1Q8NFP0 134 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 OR51F2Q8NH61 342 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 RFT1Q96AA3 541 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 SEH1LQ96EE3 360 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 NEIL1Q96FI4 390 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 CEP19Q96LK0 163 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF488Q96MN9 340 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 DNTTIP1Q9H147 329 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 PPIL3Q9H2H8 161 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 RHOFQ9HBH0 211 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 VCX3AQ9NNX9 186 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 NLKQ9UBE8 527 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 KAAG1Q9UBP8 84 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 DNAJB11Q9UBS4 358 aa9.94□□□□□ -0.82
PDLIM5-208ENST00000504489 TEP1Q99973 2627 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 TRDV1A0A1B0GX56 115 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 OR2AT4A6NND4 320 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 B4DSR2 109 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 FAM157AC9JC47 383 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 TRAPPC2LH3BP13 241 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 SPRY1O43609 319 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 ARL6IP5O75915 188 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 NXPH2O95156 264 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 PLATP00750 562 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 GYPAP02724 150 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 PSG2P11465 335 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 RPS2P15880 293 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 SRMP19623 302 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF93P35789 620 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 GMFBP60983 142 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 SMIM21Q3B7S5 101 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 HSD17B12Q53GQ0 312 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 LYPD2Q6UXB3 125 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 NLRC3Q7RTR2 1065 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 LRRTM1Q86UE6 522 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 NKAIN3Q8N8D7 197 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms