RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	B4GALT7	Q9UBV7	327 aa		11.3	□□□□□ -0.6
MATR3-233	ENST00000504203	GPR160	Q9UJ42	338 aa		11.3	□□□□□ -0.6
MATR3-233	ENST00000504203	ANXA10	Q9UJ72	324 aa		11.3	□□□□□ -0.6
MATR3-233	ENST00000504203	KMT2E	Q8IZD2	1858 aa		11.3	□□□□□ -0.6
MATR3-233	ENST00000504203		F8VVB4	439 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203		F8VWA3	439 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	KCNAB3	O43448	404 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	XRCC2	O43543	280 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	ZNF708	P17019	499 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	DTYMK	P23919	212 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	PTGER4	P35408	488 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	NUP62	P37198	522 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	ECI1	P42126	302 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	FUT6	P51993	359 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	TMEM164	Q5U3C3	297 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	STOML3	Q8TAV4	291 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	DCUN1D4	Q92564	292 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	RRNAD1	Q96FB5	475 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	OR10C1	Q96KK4	312 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	SULT4A1	Q9BR01	284 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	FAM117A	Q9C073	453 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	DNTTIP1	Q9H147	329 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203		F5H0A9	414 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	RPL36A-HNRNPH2	H7BZ11	118 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	SRY	Q05066	204 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	PDZK1IP1	Q13113	114 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	OR1C1	Q15619	314 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	STK11	Q15831	433 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	POC1A	Q8NBT0	407 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	MRPS24	Q96EL2	167 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	PIK3IP1	Q96FE7	263 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	TECTB	Q96PL2	329 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	TTTY12	Q9BZ98	90 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	LIME1	Q9H400	295 aa		11.29	□□□□□ -0.6
MATR3-233	ENST00000504203	BDP1	A6H8Y1	2624 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	MED13	Q9UHV7	2174 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	LGALS8	O00214	317 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	GEMIN2	O14893	280 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	CTSD	P07339	412 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	SFTPB	P07988	381 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	MAGEA5	P43359	124 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	RRAD	P55042	308 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	ARF1	P84077	181 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	SNTB1	Q13884	538 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PIGY	Q3MUY2	71 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PAN3	Q58A45	887 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PRSS54	Q6PEW0	395 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	TUSC5	Q8IXB3	177 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	OSR2	Q8N2R0	312 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	GALNT11	Q8NCW6	608 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	BHLHE23	Q8NDY6	225 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	OR10AD1	Q8NGE0	317 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	C2orf50	Q96LR7	162 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	MICU1	Q9BPX6	476 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	CMSS1	Q9BQ75	279 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	SHARPIN	Q9H0F6	387 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PARPBP	Q9NWS1	579 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	SLC7A11	Q9UPY5	501 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	C14orf166	Q9Y224	244 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	MT-CO3	P00414	261 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	KNG1	P01042	644 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	FCGR3A	P08637	254 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	HOXD4	P09016	255 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	OR5H8	P0DN80	308 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	ITGA3	P26006	1051 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	DHRS11	Q6UWP2	260 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	FBXL14	Q8N1E6	418 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	TMEM251	Q8N6I4	163 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PIGC	Q92535	297 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	SLC6A15	Q9H2J7	730 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	BCO1	Q9HAY6	547 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	CYTL1	Q9NRR1	136 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	PLA2G3	Q9NZ20	509 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	ABI3	Q9P2A4	366 aa		11.28	□□□□□ -0.6
MATR3-233	ENST00000504203	ZNF407	Q9C0G0	2248 aa		11.27	□□□□□ -0.6
MATR3-233	ENST00000504203		A0A1B0GW55	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM166B	A8MTA8	275 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	IFNA2	P01563	188 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L2	P0CJ85	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L3	P0CJ86	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L4	P0CJ87	422 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L5	P0CJ88	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L6	P0CJ89	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4L7	P0CJ90	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	FOXG1	P55316	489 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	PPIA	P62937	165 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	NAAA	Q02083	359 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DAZAP2	Q15038	168 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	PLCXD3	Q63HM9	321 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	GLRX5	Q86SX6	157 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	METTL8	Q9H825	291 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	OR5AC2	Q9NZP5	309 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	DUX4	Q9UBX2	424 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	MSGN1	A6NI15	193 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	CRYM-AS1	A6NIL9	109 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	OPRM1	P35372	400 aa		11.27	□□□□□ -0.61
MATR3-233	ENST00000504203	AIMP2	Q13155	320 aa	Known RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms