RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ASXL3Q9C0F0 2248 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 TIAF1O95411 115 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 CRYGSP22914 178 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 GABRR1P24046 479 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 LIAT1Q6ZQX7 453 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 DTX1Q86Y01 620 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 ELL3Q9HB65 397 aaPredicted RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 IL36GQ9NZH8 169 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 LSM5Q9Y4Y9 91 aaKnown RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 SPTBN5Q9NRC6 3674 aaKnown RBP13.05□□□□□ -0.32
SNF8-203ENST00000504000 MSTNO14793 375 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 BCAT2O15382 392 aaPredicted RBP13.05□□□□□ -0.32
SNF8-203ENST00000504000 DNPH1O43598 174 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 TMEM225BP0DP42 221 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 KLK2P20151 261 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 CHATP28329 748 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 DUSP1P28562 367 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 OR8B8Q15620 311 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 GUK1Q16774 197 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 LFNGQ8NES3 379 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 SECTM1Q8WVN6 248 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 RTN4IP1Q8WWV3 396 aaPredicted RBP13.05□□□□□ -0.32
SNF8-203ENST00000504000 PIGTQ969N2 578 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 C14orf79Q96F83 325 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 LIME1Q9H400 295 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 AK3Q9UIJ7 227 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
SNF8-203ENST00000504000 NCOA6Q14686 2063 aaPredicted RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 LOC102723996A0A087X1L8 192 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 NPIPA2E9PIF3 369 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 NPIPA3F8WFD2 350 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 AGPAT2O15120 278 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MAS1LP35410 378 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 RAB35Q15286 201 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 RHEBQ15382 184 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 RSU1Q15404 277 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ABCA11PQ4W5N1 156 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MIDNQ504T8 468 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 LHFPL2Q6ZUX7 228 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 LGI3Q8N145 548 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MSI2Q96DH6 328 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 CLCC1Q96S66 551 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 TCEAL7Q9BRU2 100 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 PBDC1Q9BVG4 233 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 RYDENQ9NUL5 291 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 PLEK2Q9NYT0 353 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ZNF850A8MQ14 1090 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MASP2O00187 686 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ST8SIA3O43173 380 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNF8-203ENST00000504000 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ZNF44P15621 663 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 GLP1RP43220 463 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 RBP2P50120 134 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 PPT1P50897 306 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 RAB1AP62820 205 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 OR8G5Q8NG78 346 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 HDHD3Q9BSH5 251 aaPredicted RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 FAAP24Q9BTP7 215 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 RGCCQ9H4X1 137 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 WDR54Q9H977 334 aa13.04□□□□□ -0.32
SNF8-203ENST00000504000 METTL1Q9UBP6 276 aaKnown RBP13.04□□□□□ -0.32
SNF8-203ENST00000504000 C7orf77A4D0Y5 90 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
SNF8-203ENST00000504000 MYF5P13349 255 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 ID4P47928 161 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 LBX1P52954 281 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 EIF2S3LQ2VIR3 472 aaKnown RBP13.03□□□□□ -0.32
SNF8-203ENST00000504000 SNAI3Q3KNW1 292 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 KRTAP27-1Q3LI81 207 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 GPR137CQ8N3F9 429 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 CCDC71LQ8N9Z2 235 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 OR1J1Q8NGS3 322 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 RPS10P5Q9NQ39 176 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 SLC2A9Q9NRM0 540 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 C19orf12Q9NSK7 152 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 NXT1Q9UKK6 140 aaKnown RBP13.03□□□□□ -0.32
SNF8-203ENST00000504000 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 PTRH2Q9Y3E5 179 aaKnown RBP13.03□□□□□ -0.32
SNF8-203ENST00000504000 BRWD1Q9NSI6 2320 aa13.03□□□□□ -0.32
SNF8-203ENST00000504000 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
SNF8-203ENST00000504000 SYNGR3O43761 229 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms