RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TMEM200BQ69YZ2 307 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 CATSPERDQ86XM0 798 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 GID4Q8IVV7 300 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 MKXQ8IYA7 352 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 ZSCAN4Q8NAM6 433 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-204ENST00000503215 NPRL2Q8WTW4 380 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 RORBQ92753 470 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-204ENST00000503215 EME1Q96AY2 570 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 MNTQ99583 582 aa13.26□□□□□ -0.29
SCLT1-204ENST00000503215 WARS2Q9UGM6 360 aaKnown RBP13.26□□□□□ -0.29
SCLT1-204ENST00000503215 IGKV1-27A0A075B6S5 117 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 MEX3AA1L020 520 aaKnown RBP13.25□□□□□ -0.29
SCLT1-204ENST00000503215 H0YAE9 185 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 ANGPTL7O43827 346 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 NOS1APO75052 506 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-204ENST00000503215 CCL3L1P16619 93 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 CCL1P22362 96 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 HTR1FP30939 366 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 SLC34A1Q06495 639 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 UBE2V2Q15819 145 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 SMIM21Q3B7S5 101 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 BRICD5Q6PL45 260 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 ZNF573Q86YE8 665 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 RDH10Q8IZV5 341 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 PRSS35Q8N3Z0 413 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 CENPNQ96H22 339 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-204ENST00000503215 OSBPL10Q9BXB5 764 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 GABARAPL3Q9BY60 117 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 MOB1AQ9H8S9 216 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-204ENST00000503215 OR14J1Q9UGF5 321 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 CMYA5Q8N3K9 4069 aa13.25□□□□□ -0.29
SCLT1-204ENST00000503215 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 FAM230AA0A1W2PPH8 454 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 METTL15A6NJ78 407 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 INMTO95050 263 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 NXPH2O95156 264 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 PAHP00439 452 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 KRT8P05787 483 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 OR2T7P0C7T2 308 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 ACTR3P61158 418 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 RPL15P61313 204 aaKnown RBP13.24□□□□□ -0.29
SCLT1-204ENST00000503215 ERVK11-1P61568 191 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 RPL31P62899 125 aaKnown RBP13.24□□□□□ -0.29
SCLT1-204ENST00000503215 ZNF85Q03923 595 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 ZNF273Q14593 569 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 NCR3LG1Q68D85 454 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 OR2T27Q8NH04 317 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 PYDC1Q8WXC3 89 aa13.24□□□□□ -0.29
SCLT1-204ENST00000503215 CAB39Q9Y376 341 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-204ENST00000503215 ANKRD61A6NGH8 418 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 CLPXO76031 633 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 PIPP12273 146 aaPredicted RBP13.23□□□□□ -0.29
SCLT1-204ENST00000503215 FCGR1AP12314 374 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 MPZP25189 248 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 KIR3DL2P43630 455 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 ACSM1Q08AH1 577 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 TP53I3Q53FA7 332 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 HIST2H2BDQ6DRA6 164 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 DHRS7BQ6IAN0 325 aaPredicted RBP13.23□□□□□ -0.29
SCLT1-204ENST00000503215 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 GDPGP1Q6ZNW5 385 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 PPP1R35Q8TAP8 253 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 PPA2Q9H2U2 334 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 MTCH1Q9NZJ7 389 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 SIGLEC9Q9Y336 463 aa13.23□□□□□ -0.29
SCLT1-204ENST00000503215 SF3B6Q9Y3B4 125 aaKnown RBP13.23□□□□□ -0.29
SCLT1-204ENST00000503215 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 H3BUX3 64 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 SYT7O43581 403 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 COX7A1P24310 79 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 LY6EQ16553 131 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 BEND2Q8NDZ0 799 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 OR5D13Q8NGL4 314 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 OR8J1Q8NGP2 316 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 PPP1R14BQ96C90 147 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 SSX3Q99909 188 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 NOTCH1P46531 2555 aa13.22□□□□□ -0.29
SCLT1-204ENST00000503215 BTBD17A6NE02 478 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 DHRS7CA6NNS2 312 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 SLC1A7O00341 560 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 SULT1C4O75897 302 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 TSPAN9O75954 239 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 TK1P04183 234 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 ATP6V1E1P36543 226 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 BMXP51813 675 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 DLX6P56179 175 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 ISL1P61371 349 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 DEFA6Q01524 100 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 COL10A1Q03692 680 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 SLC35E4Q6ICL7 350 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 ZNF782Q6ZMW2 699 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms